| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6192 |
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| Symbol | |
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| ID | 8362374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7811866 |
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| End bp | 7812864 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968320 |
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| Product | Mammalian cell entry related domain protein |
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| Protein accession | YP_003125799 |
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| Protein GI | 256425146 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
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| TIGRFAM ID | [TIGR00996] virulence factor Mce family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.387563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAAAG TATCTAACGA AACCAAAGTA GGCGTCCTTG CAGCTATATC AATTGCATTG
CTGATTTTGG GTTTTAATTT GTTAAAGGGA AAAAGCCTTT TTTCAACCAG TAAGAAAATT
TACGCCGTAT ATACCCAGGT AAATGGCCTT CAACCATCCG CAACCGTTCA GGTGAACGGA
CTCGTGGTAG GTAGCGTGTC TAACCTGGAA ATCATGGATA AGAACGCCGG AAGGATCCTG
GTGGAACTGC GTATCACCAA AAAGATCGAC ATCCCGCAAA ACTCAGTGGC ACGCATCTCC
AGCGACCTGT TAGGTACCAA AACCGTACAG ATCGACTTCG GTAACGCCAA TGCCTATCTG
CAAAGCGGCG ATACCATCTA TGCCGCTGTC GATGGTTCCA TCACCGACGC ACTCAAAGAA
CAACTGAACC CGCTCGTGAA AAAACTTGAA GGTACCCTGG GTTCCGTAGA CTCCGTTCTG
CTCACCGTCA ATTCCATCTT CGATCCGTCT ACAAAAGGTA ACCTGCGTGA AGCCATCGCT
CACCTGAATA CCACCATGAA CAACTTTACC CGTACCTCCG CCTCTTTAAA TGGTATGCTG
GACCCTCAGC ACGGAAATGT AAAGGCGACG TTCGACAACC TGGAAGCACT GACCGCTAAT
CTTAAAAACA ATAACGATAA AATCACCGCC ATACTTGGTA ACGCAGAAAA AACAACTGCC
GCCCTCGCAA ACGGTGAACT CGATAAAACA CTGGTGCAAT TACATCAGCT GTCCACACGC
CTGAACGAAA CAATTACCAA ATTAAATAGT ACCGACGGTT CCGTAGGCCT CATGCTGAAC
GACAAGCAGG TATATAATAA TCTGCAAAAC TCACTCAGTA ACCTGAACAA ACTGCTGGAA
GATCTGCGCG TGAATCCAAA ACGTTACGTA CACTTCTCCC TGTTCGGTAA AAAAGCGAAA
GTACAGCCCA TACCATCTGA CACCGCGAAG GCACTATAA
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| Protein sequence | MLKVSNETKV GVLAAISIAL LILGFNLLKG KSLFSTSKKI YAVYTQVNGL QPSATVQVNG
LVVGSVSNLE IMDKNAGRIL VELRITKKID IPQNSVARIS SDLLGTKTVQ IDFGNANAYL
QSGDTIYAAV DGSITDALKE QLNPLVKKLE GTLGSVDSVL LTVNSIFDPS TKGNLREAIA
HLNTTMNNFT RTSASLNGML DPQHGNVKAT FDNLEALTAN LKNNNDKITA ILGNAEKTTA
ALANGELDKT LVQLHQLSTR LNETITKLNS TDGSVGLMLN DKQVYNNLQN SLSNLNKLLE
DLRVNPKRYV HFSLFGKKAK VQPIPSDTAK AL
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