Gene Cpin_6145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6145 
Symbol 
ID8362327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7745076 
End bp7746218 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content47% 
IMG OID644968275 
Productpeptidase S15 
Protein accessionYP_003125754 
Protein GI256425101 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000966122 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGC GCAGTTTACT GCATTCCTGC AATTTTAACA CCATGAGTTT CTTACATACA 
TTACTACTGA CGCTGCCTTC TTTCTTTCAT CCAGGGTCGC AGCCGCTTCC TGCAGATACG
CCGTATCAGT CTGTAAATGT CGATTACTAT AATGCAGACA GTACGGTGCA TTTTGGTGCT
ACACTGACGA TGCCACATAC AAAGAAGCCT TGTCCGGCAG TGGTACTGTT ATCCGGTACA
GGTAAGCAGG ACAGAGATGG TACGATGGCA GGGCATAAGA TGTTTTTCGT CATTGCAGAT
TATCTGTCCA GGAATGGGAT AGCTGTACTG AGAGTAGATG ACAGAGGCGT GGGAGCCACC
GGTGGTGAAT ATGAAGATGC CACTACCGCC GATTTTGCAA ATGATGCATT AACCGGGCTG
CACTGGCTGA TGGGGTATAA AGGCATCAAT CCGCATAAGG TGGGATTGAT CGGTCATAGT
GAAGGCGGTG CAGCGGCGTA TATTGCGGCT TCAGAAAGCC GGGATGTGGC GTTTATCATC
TCGCTCGCGG GACTGGCTAC ACCAGGATTG CAGGCACTGA AAAAACAGAA TGAGATGATT
GTGCATAAAG CACCTATTTC AGAACAAAAG AAATATCGCT TTAACAGTAT CAACGAGGTG
ATGTTTGATA CGGTATATGC ATACGCACAA TCACCGGCAT TGGAAGCGCA CATGCGGAAT
GCATATAAGA TCTGGCAGGC GGCAGACAGT GCCTATATGG TGGCCCATCC ACAGGATCCT
GCTGACAAAG GCCGTTTCTT TTTTCCGATG GAGTCATATG TCATGATGGC TACCGGCCCC
TGGTACCGTT ATCATGTACG CTTTGACCCT GCGCCTTTTC TCGAAAAGAT AAAAGTGCCT
TTCCTGGCCA TTAACGGAGA CAAGGATATT ATGGTCGATG CAGAAAGCAG TCTGGCTTAT
ATCACGCAAC ATACTGCGGA CAATAAAAAT GTCACAACGC TGAAAGCACC AGGTTTAAAT
CACCTGTTTC AGCATTGTAA GGAATGTACG AACAGTGAAC CATCACAGCT AAAAGAGGAT
TTCGCTCCTG AAGTCCTGCA CACCATATCC GAATGGATCA AAAAAAATAC CGGCTCGCAT
TAA
 
Protein sequence
MMERSLLHSC NFNTMSFLHT LLLTLPSFFH PGSQPLPADT PYQSVNVDYY NADSTVHFGA 
TLTMPHTKKP CPAVVLLSGT GKQDRDGTMA GHKMFFVIAD YLSRNGIAVL RVDDRGVGAT
GGEYEDATTA DFANDALTGL HWLMGYKGIN PHKVGLIGHS EGGAAAYIAA SESRDVAFII
SLAGLATPGL QALKKQNEMI VHKAPISEQK KYRFNSINEV MFDTVYAYAQ SPALEAHMRN
AYKIWQAADS AYMVAHPQDP ADKGRFFFPM ESYVMMATGP WYRYHVRFDP APFLEKIKVP
FLAINGDKDI MVDAESSLAY ITQHTADNKN VTTLKAPGLN HLFQHCKECT NSEPSQLKED
FAPEVLHTIS EWIKKNTGSH