Gene Cpin_6139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6139 
Symbol 
ID8362321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7739548 
End bp7740567 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content46% 
IMG OID644968270 
Producthypothetical protein 
Protein accessionYP_003125749 
Protein GI256425096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGAATT ATGTGACTAA TTACGCCAGG GATGAAAAGG TGAAAGCGCA ATATAGACCC 
CTGACACTTG CGCAGGGAAA GAAATGTATA ACAATCTTTC CTGAAGGATC TTATTTCGCA
CACTGGCAGG AAGACATGAT GGCAATATAT GCCAATCAGG TCGGCTGGTT TTCTTGTTTG
GATGAAGAAG ATCCTGTTAA ACTGGAAGAA GCGCTCGCAT TATTGGAAAG AGGATTTAAG
ATCTATGATC CTAATAGACA TAAATACCTG GAAGATACAA AAACGCGTTT GCTGTTAAAA
TTAGGTAAGA CAGCCGAAGC CTACAAAATA GTAGCAGCAG CGCTGAAGAA AGATCCGAAA
GATCCCGATT TCCAGGATCT CAAAAAGGAT CCTGCATATC TCGCCTGGGG GAAGCAAGCA
AAAAGTGCCG CGAAAGAAGA AGAAAAGGTA TATCAGCAGG CAGTACAGGA GGAGATGCAA
AAAGTGACGG ACAGCTTCCG GCATCCTGAA CATCCGCTCA TACAGCAACA TGCTGCTGCA
TTGAATCTGA TCAAACAACG GATGGTGACT GTCCGTATGA ATTACGCAAT AAAGAGCAGG
AGGGAGAGAC GGGCTTATCT CCTGGAGATA GGTAGCGGCG GAGAAGGTGT TTATTATGGA
AACGATGGTG TTCCTGCGCT GAGCGATCTG CCTAAGTCGG ATTATAAACA AATCGCAAAA
CCTTTCCCTG CCGTTGGTGG AAAAATAAAA GCACCTTTTA AGCTACCGAC CGGGGTTCAA
TTTACAGACG GATGTATTCT CCTGGGCTAT TCCCATGCAC AGAATGCACT TTACCTTGTT
ACAAACGGGG ACTGTGAAGG AGAAGTATGG TTTGATACGC TGCAATATGG CGCTGAGGCA
GGAGGTAAGT TTGCACCGGC TTCCAACAAA CGCCTGAAGC TACTGGCATT CCTCGCAGAA
AGTATACAGG CTACTATCGA CGGTATATGG AAGGCTTCGG AAGAAGGCGA TTGGCTGTAA
 
Protein sequence
MLNYVTNYAR DEKVKAQYRP LTLAQGKKCI TIFPEGSYFA HWQEDMMAIY ANQVGWFSCL 
DEEDPVKLEE ALALLERGFK IYDPNRHKYL EDTKTRLLLK LGKTAEAYKI VAAALKKDPK
DPDFQDLKKD PAYLAWGKQA KSAAKEEEKV YQQAVQEEMQ KVTDSFRHPE HPLIQQHAAA
LNLIKQRMVT VRMNYAIKSR RERRAYLLEI GSGGEGVYYG NDGVPALSDL PKSDYKQIAK
PFPAVGGKIK APFKLPTGVQ FTDGCILLGY SHAQNALYLV TNGDCEGEVW FDTLQYGAEA
GGKFAPASNK RLKLLAFLAE SIQATIDGIW KASEEGDWL