Gene Cpin_6127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6127 
Symbol 
ID8362309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7727289 
End bp7727804 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content44% 
IMG OID644968258 
Producthypothetical protein 
Protein accessionYP_003125737 
Protein GI256425084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA GGATAGTGAT CAACTTCTGT ATTGGTACAG AACAGGACCG TCGTACCCTA 
TCATTTATCG GTAAGGCTAC TATAAAGGAA AAGTTCAATG GTAGGGTTTC GGAACCGGCA
ATAACAGCAT ATATCGAGCA TCACTACAGC GATCATACAT TGCGTGGTGA ATTGAATAAC
ATTTCCAATC AGGTACTGGT CGCTTTCGTG GATGGCGAGG TGGCAGGATA TGCGCGGATC
ACTACAAAAG GTGAACGACC GGAAATACTC CAGGGGAAAA GTGTAGCTCG TATTGCTGAC
TTTTCAGTAT TGGAAAGATT CCATGAAACC GCTGTCAGAA AGCTCTTATT CGAAAAGTGT
CTCTGTATTT GCAAAACCCG GCAGACCGTC TGGATAAGTG AACACGAAGG TGCTGCCGAC
CTGACGCTGT TTACAGACTA TGGATTCATA AAGAACACAA CTATAAGCGG CGTTAATGAA
CTGGGCATAC CATTGGTCTA TCTGATAAAA GAATAA
 
Protein sequence
MTNRIVINFC IGTEQDRRTL SFIGKATIKE KFNGRVSEPA ITAYIEHHYS DHTLRGELNN 
ISNQVLVAFV DGEVAGYARI TTKGERPEIL QGKSVARIAD FSVLERFHET AVRKLLFEKC
LCICKTRQTV WISEHEGAAD LTLFTDYGFI KNTTISGVNE LGIPLVYLIK E