| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6102 |
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| Symbol | |
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| ID | 8362284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7699973 |
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| End bp | 7700731 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644968233 |
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| Product | two component transcriptional regulator, LytTR family |
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| Protein accession | YP_003125712 |
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| Protein GI | 256425059 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTAG TAATTATAGA AGATGAAAAA CCAAATATCA CACGTTTGAA GAAAATGCTG
ACAGATGTCG ATCCTGACAT CGAAGTCATC GCCGTACTTG ATACCATTAC AGAAAGTGTA
GCCTGGTTTG CAGCACATCC ACATCCGGAT GTGGTACTGA TGGATATCCG TATTTCCGAC
GGACTAAGCT TTGATATCTT CCCCAAAGTA AAATTCGCTT GTCCGGTAAT CTTTGTGACC
GCTTATGATG AATACGCGGT GCGCGCTTTT AAGGTCAATA GCCTTGATTA CCTGCTCAAA
CCTGTAGAAA GAGATGACCT GCAACAAGCA CTCAATAAAG TAAAAGCGGT AAAACAACCA
CCCGATACCG AAGAATTGAT GAAGCACCTC CTGGACCTGC TCAGTAAAAA GGAAGCAACC
TATAGAACCC GCTTCATGAT TCCTTTCCGC GATGAATACA GAACTATTCC TGTTACAGAT
ATTGACTTTA TTTACTATAG TATCGCTGGT ACCCATCTGG TACTGAAGGA CCGTACGCAA
TTACCCATCA GCCTTACCCT GGAGGAACTG GAAGAGCAAC TGGATCCGCA GGTATTCTTC
CGTGTTAACC GGCAGCATAT TATTCATGCG GACAGTATTG ATAAAATACA GACTTATTCT
ACCAGTAAGT TGCGTGTGGT GCTGAAACGC GATCTGGAAA GAGAAGTCCT GATCAGCAGG
GAGAAGGTGC CTTTGTTCAA ACAGTGGCTG GACAGGTGA
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| Protein sequence | MRVVIIEDEK PNITRLKKML TDVDPDIEVI AVLDTITESV AWFAAHPHPD VVLMDIRISD
GLSFDIFPKV KFACPVIFVT AYDEYAVRAF KVNSLDYLLK PVERDDLQQA LNKVKAVKQP
PDTEELMKHL LDLLSKKEAT YRTRFMIPFR DEYRTIPVTD IDFIYYSIAG THLVLKDRTQ
LPISLTLEEL EEQLDPQVFF RVNRQHIIHA DSIDKIQTYS TSKLRVVLKR DLEREVLISR
EKVPLFKQWL DR
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