| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6083 |
|---|
| Symbol | |
|---|
| ID | 8362265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7682051 |
|---|
| End bp | 7683655 |
|---|
| Gene Length | 1605 bp |
|---|
| Protein Length | 534 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644968214 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003125693 |
|---|
| Protein GI | 256425040 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.753473 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACGC TATTATGGGC CTTGTGTGCC CTTCTGTTGT TCGCGTGTAA CAAATCGTCA
CTCGAACCTG TCACTCCACG TCTGAAAGCT GATCTGAAAG CCGTTGTACC AGTCACCAAA
ACGACCAGCA AGAAGATCTT TATTCATTGG ATGCCCTGGT TTGAAACACC TGCATCCAGA
GGCGCCTGGG GTTATCACTG GAAAATGAAC AACCAGAATC CTGACATTAT CGTCAATGGT
AAAAGACAGA TTGCCGCTTA TTTTTATCCT AAGACGGGGC CTTATGCTTC CGCTGATCCG
GACATCATCG AATATCAGCT CCTGCTGATG AAGTATGCCG GTGCAGATGG TGTATTCATT
GACTGGCCGG GTACCAGACA GCGGTATGAT TACCCGGATA ATCTGGCTAA TTCCAATGCG
CTGATCAGTA AACTGAATGC TGTCGGTTTA CAATTCTCCA TCGTACACGA AGACAGAAAC
TGGGATCCGG GTATGGCTGC GAATGCCAAT GGCGATTTCG TATACATGCA GAATAACTAT
TTCAATCAGG GTAATTACCT GCGTAACAGC AGTAATGAGC CTGTTGTACT GAACTTCGGA
CCTATCACCT TTCATCAGCC TTCAGAGTGG AATACCATGC TGAATGGGAT TAATCCGCGT
CCTAAGATCA TTCCGTTGTT TGGCTTTACC AATGAAGTAG GGGCGAACAA TGCCGGTGGA
GAATTCCCCT GGATCTACCA GGAGCATCCG GGTGTAGTAG ACCGTTACTA CACACAGGCA
GCCAGCTTCC CGCTGTCTAT CGGTGTGGTA TATCCTGGGT TTAAATCTTT TTATCAGGCA
GGCGGTGCTG ATGGCCCTAC CTGGCAGATT GCACACAATG GCACTTCTAC CTTCTCTACC
ATGCTGGATA AGGCGTTGGC TTCCAGTGTG AAGATCATAC AGTTTGCTAC CTGGAATGAC
TATGGGGAAG GTACTATTAT CGAACCTACA GAGGAGTTTG GTTATTCTTT CCTGACCGTT
ATGCAGCAGA AACTGGGGGT ACCTTATGGT CAGCATGAAC TGGAGGTGAT CTACCGTCTC
TATCAATACA GAAAGCAATA TTCGGGTAAT GGCAGTATAC AGCAGCAGCT GAACCAGGTA
TTCTCTTACC TGGCGAATTT GCAGGTGGGA AATGCCGAGA ACCTATTGAA CAGTATCAGT
GGTGGCAACA ATCCGGGTAA TCCGCCTGCT ACGGGAGTAC TGATCAAAAA CAGGTGGCTG
AACACTTACC TGTATGAACA GAACGGACAG GTAAGATATA ATACCAGCAA TACGGGTAAT
CAGTATCGCT GGATACAGGA AACGGTAAAC GGGCATATCC GCTTTAAGAA TGCGGCTACC
GGCAATTACC TGAACATCGA GCACCTGTAT AACTATGTGG AAAGTTCTAA TGTGCCTGAT
ACCTTTTACA GCAGTTACTG GGCCCTGGAA AGTTACAATG GTTATACCCG TTTGAGAAAT
GAGTGGCAGA ATACTTACCT GAACCTGGAG AATCAAAGCG GTCTGGCGCA ATGCACTAAT
GTTCCGGCTA ATTTTGAGAG TGGTCAGTGG ACTTTGCAGA ATTAA
|
|---|
| Protein sequence | MRTLLWALCA LLLFACNKSS LEPVTPRLKA DLKAVVPVTK TTSKKIFIHW MPWFETPASR
GAWGYHWKMN NQNPDIIVNG KRQIAAYFYP KTGPYASADP DIIEYQLLLM KYAGADGVFI
DWPGTRQRYD YPDNLANSNA LISKLNAVGL QFSIVHEDRN WDPGMAANAN GDFVYMQNNY
FNQGNYLRNS SNEPVVLNFG PITFHQPSEW NTMLNGINPR PKIIPLFGFT NEVGANNAGG
EFPWIYQEHP GVVDRYYTQA ASFPLSIGVV YPGFKSFYQA GGADGPTWQI AHNGTSTFST
MLDKALASSV KIIQFATWND YGEGTIIEPT EEFGYSFLTV MQQKLGVPYG QHELEVIYRL
YQYRKQYSGN GSIQQQLNQV FSYLANLQVG NAENLLNSIS GGNNPGNPPA TGVLIKNRWL
NTYLYEQNGQ VRYNTSNTGN QYRWIQETVN GHIRFKNAAT GNYLNIEHLY NYVESSNVPD
TFYSSYWALE SYNGYTRLRN EWQNTYLNLE NQSGLAQCTN VPANFESGQW TLQN
|
|---|
| |