| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6062 |
|---|
| Symbol | |
|---|
| ID | 8362244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7660812 |
|---|
| End bp | 7661600 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644968196 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003125675 |
|---|
| Protein GI | 256425022 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACAT CTGCAACAAC AAAATGGTAT ATCAATGGCG CACTGCTCGC GGTAGTAATG
GTAGTAATGA ACCTTTTCGC AGCATCTGCT GCACTTGCCC AGAAAAAAAC AGCTAAAAAT
ATTGTAATCG TTCATGGCGC GTTTGCCGAT GGTTCAGGAT GGAAGAAAGT GTATGAGATA
CTGGTGAAGA AGGGGTATCA TGTGTCCATT GTACAGAATC CGCTGACCTC TCTGGAAAAT
GACGTAACAG CTACCAAGAA TGTGTTAGAT AAACAGGATG GTCCTGTGGT ACTGGTGGGG
CACTCCTGGG GTGGTACTGT GATTACCCAG GCGGGTACAC ACGATAAAGT GGCTTCTCTT
GTATATGTGG CTGCATTCCA GCCTGATAAG GGAGAAAATA CGATTCAGTG GGTAAAATCA
GCACCAGCGG CGCCTGAAAA CGGTATCCTG GCTCCGGACG ATAAAGGATT TGTATATTAT
GACAAGGCTA AATTCCATGA TGGTTTTGCG GGAGACCTGC CTACAGCAGA AACTGATTTT
ATGTATGCTT CCCAGCAACC TATCGCTGCT GCCAGTTTCG GTACACCGGT AACTGACGCT
GCGTGGAGAA CAAAACCAAG TTATGCGATT GTGGCTACTG AAGATAAAAG TATCGTACCT
GATGTAGAGC GTAATATGTA CAAACGTTCA GGTGCGAAAG TAACAGAAGT AAAAGGCAGT
CATGTAATAT TTATGTCTAA ACCGGCGGAA GTGGCGAAAG TGATTATTGA GGCGGCTGAG
GGAAAATAA
|
|---|
| Protein sequence | MTTSATTKWY INGALLAVVM VVMNLFAASA ALAQKKTAKN IVIVHGAFAD GSGWKKVYEI
LVKKGYHVSI VQNPLTSLEN DVTATKNVLD KQDGPVVLVG HSWGGTVITQ AGTHDKVASL
VYVAAFQPDK GENTIQWVKS APAAPENGIL APDDKGFVYY DKAKFHDGFA GDLPTAETDF
MYASQQPIAA ASFGTPVTDA AWRTKPSYAI VATEDKSIVP DVERNMYKRS GAKVTEVKGS
HVIFMSKPAE VAKVIIEAAE GK
|
|---|
| |