Gene Cpin_6048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6048 
Symbol 
ID8362230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7646560 
End bp7646970 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content42% 
IMG OID644968182 
Producthypothetical protein 
Protein accessionYP_003125661 
Protein GI256425008 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.184107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0647428 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATGTTT ATGCAGAGAA GTTACAACCC TCTGTCGGAT TTCGTAAACA GGCGATTAAA 
GTTATCAGCA CTATCGTGTT ATTTCTGATA ACCTACCTGA TTTTACTGGC TGCATCTGTA
GCTTTTGCTG TATTGTGTTG TTATATAGGG TGTTGGCTGG CAACTAAGGT ACCAGGCGTT
ATGACTATTA TCGCGGGGCT TGGTCTGCTC GTGCTGGGCG GTGCTGTTGT ATTCTTCATG
GTAAAGTTCG TTTTTACTGT TTCCAAAGAT GAAAAAGAGG CAAGAGTGGA GACGAACGAG
ACGAATACCC GGTTTCCCAA GAAAATATAT CTTTCTCAGG ATGTAAATGC CTGTGTATTT
TATCATTCCA GTTTCTGGAG CATGTTTCCT GCCTATTCCG AAGAACCTTG A
 
Protein sequence
MNVYAEKLQP SVGFRKQAIK VISTIVLFLI TYLILLAASV AFAVLCCYIG CWLATKVPGV 
MTIIAGLGLL VLGGAVVFFM VKFVFTVSKD EKEARVETNE TNTRFPKKIY LSQDVNACVF
YHSSFWSMFP AYSEEP