Gene Cpin_5990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5990 
Symbol 
ID8362172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7595654 
End bp7596670 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content46% 
IMG OID644968126 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003125605 
Protein GI256424952 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATAA AAACAAGACA AAAAAAAGGC GTACGGTTCC ATCAGGCTGG TGGACCAGAA 
GTATTAAAAG TTGAACATGT CGATGTACCT GCCCCCGGAC CACAGGAAGT GCGGCTCCAG
GTGAAAGCAA TCGGCTTAAA CCGTATCGAC TCATTCTTCA GAAGCGGTTA CTTTTCCGAA
CAACCTATCT TCCCTTCACT CTTAGGCTTT GAAGCTTCCG GCGTTATCGA GTCTGTTGGC
GACCAGGTAA AAGATTTCGC TCCGGGAGAT GTTGTGAGCG TTATCGCAAA ATTTTCCAAT
CATGATTATG GTACATACGG AGATCTTATT ATACTGCCGG CAGCCAGCCT GGAGAAACAC
CCATCTAATC TGACTTTCGA AGAGGCTGCA GCATTATGGG TAAGTTACCT TGCTGCCTAT
GGCATGTTGG TGGATAGTGC AAACCTGAAG CCTGGCCAGT ATGTGCTGTA CAATGCAGCA
TCCAGTAACA CAGGACACGC TATCACTCAA ACCATCAAAC TGTTAGGTGG TATTCCCATT
GCATTAACTA GCACTCCATC AAAGAAACGG GCCATTTCAG ATCTCGGCGT GCAACACATT
ATTGTAACAA CTGAACAGCA TATATCAGAA GAAGTCCTCA AAATAACCAA CGGTAAAGGT
GCAGATGTAA TCCTGGATGC TGTCGGAGGC AAACAGTTTG AACTCCTTAT CAACGCAGCT
GCAAATTATG CGAAGGTGTT TGCATACGGC GCGCTCGATC TGGAACCAGG ACCATGGCCT
ATGCTGGGAG TCGTACTAAA AAAGATCTCT ATTACCGGTT ATGATATGAC CGATACATTG
ATGGACGCAA AGAAAATCAA CGCAGCGATC GCCTTTGTAA AAACCGGCGT TCAGCATGAG
AAGCTTAAAC CGGTCATCGG ACCCAAGTTT TCACTAACTG AGGTAGTGGA AGCCCATCGC
ACATTAGAAC GCAATCAACA TATTGGTAAG ATAGTTCTCA TACCTGAAGG CGTCTAA
 
Protein sequence
MEIKTRQKKG VRFHQAGGPE VLKVEHVDVP APGPQEVRLQ VKAIGLNRID SFFRSGYFSE 
QPIFPSLLGF EASGVIESVG DQVKDFAPGD VVSVIAKFSN HDYGTYGDLI ILPAASLEKH
PSNLTFEEAA ALWVSYLAAY GMLVDSANLK PGQYVLYNAA SSNTGHAITQ TIKLLGGIPI
ALTSTPSKKR AISDLGVQHI IVTTEQHISE EVLKITNGKG ADVILDAVGG KQFELLINAA
ANYAKVFAYG ALDLEPGPWP MLGVVLKKIS ITGYDMTDTL MDAKKINAAI AFVKTGVQHE
KLKPVIGPKF SLTEVVEAHR TLERNQHIGK IVLIPEGV