Gene Cpin_5973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5973 
Symbol 
ID8362155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7579729 
End bp7580295 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content37% 
IMG OID644968113 
Producthypothetical protein 
Protein accessionYP_003125592 
Protein GI256424939 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.666558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTG AAGAATACTA TACCTACTTT GAAAGTATCA TCAATCACGA TCCATCTACA 
CTAGTTACTC CTTATGACAA ACAGGAATAC ATAGATTATA CAAGGCTCAA CTGGAGCCGG
ATGAACCGGT GGTTAAAAAA GGGCCAATTA TCTGATGAGC TCCTGGAAAT TGTCAAAAAA
ATCTGTATAC CTCAAACCTG GATTGTTATA ACAGAGCCAT GGTGTGGTGA TGCTGCACAC
AGTATACCAT TTATAAAAAT GATAAGTGAT ACTAATCCAC TTATAAATGT TTTATATGAA
TTAAGAGATA GTGAACCGTA TAGGATTAAC AGCTATCTTA CTAAGGGGAG CAAGTCTATT
CCTAAGGTTA TTTATAGAAG TGATAAAGAA GCTGATGTGA TGGTATGGGG GCCGCGCCCT
TTGAAATGCC AGCTTATGTA TGATCAACTT TTGGCTAATC AGGCACCATT TGAAGAAATA
AAAACAGCAC TTCAACATTG GTATAATACT AATAAAGGCG TAGATATTCA GCAGGAGCTG
GCAATACAGT TAAGCAAAAA GCTGTAG
 
Protein sequence
MTFEEYYTYF ESIINHDPST LVTPYDKQEY IDYTRLNWSR MNRWLKKGQL SDELLEIVKK 
ICIPQTWIVI TEPWCGDAAH SIPFIKMISD TNPLINVLYE LRDSEPYRIN SYLTKGSKSI
PKVIYRSDKE ADVMVWGPRP LKCQLMYDQL LANQAPFEEI KTALQHWYNT NKGVDIQQEL
AIQLSKKL