| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5952 |
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| Symbol | |
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| ID | 8362133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7557929 |
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| End bp | 7559410 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968091 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_003125571 |
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| Protein GI | 256424918 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00408] prolyl-tRNA synthetase, family I |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000821965 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0117202 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTAAAG AGATCACAGC CCGTTCTGAA GATTATTCAC AATGGTACAA TGATTTGATT
ATTAAAGGCG GATTAGCGGA TTATTCTGCT GTGAGAGGTT GTATGGTAAT AAAGCCATAC
GGTTTTGGAT TGTGGGAAGG CATGAGAGAC GTGCTGGACG CTAAATTTAA AGAGACAGGA
CATCAGAACG CTTATTTCCC CTTATTCATA CCCAAAAGCT TTCTTAGCAA AGAAGCTGAG
CACGTAGATG GTTTTGCCAA AGAATGTGCG GTTGTGACTC ACCACCGCCT GATGCAGAAT
CCTGATCCGA ATGTAAAAGG ACTAGTGGTA GATCCTGAAG CAAAACTGGA GGAAGAACTG
ATCGTTCGTC CGACTTCTGA AACGATTATC TGGAATACAT ATAAAGACTG GATTCAGTCA
TACCGTGACC TGCCGCTGCT GATTAACCAG TGGGCGAACG TCGTACGCTG GGAAATGCGT
ACCCGACTGT TCCTGCGTAC CGCAGAGTTC CTGTGGCAGG AAGGTCATAC TGCCCACGCA
ACCGCCGAAG AAGCGATCGC TGAAACCAGG CAGATGCTGG AGGTATATGC TGACTTCGCT
GAAAACTATA TGGCACTGCC GGTAGTAAGA GGGGTTAAAT CTCCCGCTGA ACGTTTTGCC
GGTGCGCTGG ATACTTATTG TATCGAGGCC CTCATGCAGG ATGGTAAGGC GCTGCAGGCA
GGTACTTCTC ACTTCCTGGG ACAGAACTTC GCTAAAGCAT TCGATGTGAA ATTCTCCAAC
AAAGAGAATA AACAGGAATA TGTATGGGCT ACCTCCTGGG GGGTTTCCAC CCGTTTGATC
GGTGCACTGG TTATGGCGCA CAGTGATGAC GACGGTCTGG TACTGCCTCC ACGTATCGCG
CCATTACAGG TTGTGATCGT GCCTATCTAT AAAGGTGAAG AGCAGAAGAG CAAGATCGAT
GCAAAAGTGG ACGAAATCAT CTCCGGACTG AAAAAGCTTG GTATCCGTGT GAAATATGAC
GATTCTGACA ATGCCCGTCC AGGATGGAAA TTTGCAGAAT ATGAAATGAA AGGCGTACCT
GTACGTATCG CTCTGGGCGC ACGCGACCTG GAAAACAACG TAGCAGAAGT AGCCCGCCGC
GATACGAAAA CCAAAGAAAG TCTGTCACTG GACGGACTGG CTGAACGTAT CAGCGCATTA
CTGGAAGAAA TTCAGTCGCA GATGTATAAC AAAGCGCTGA CATTCAGAGA TGAGCATATC
ACTCCTGCTA ACACGATGGA AGAATTCGAA CGTCTGCTGG ATGAAAAAGC TGGTTTCATT
TCCGCACACT GGGACGGTAC AACCGAAACG GAAGAAAAAA TCAAGGAACT TACAAAAGCA
ACCATCCGTT GCATTCCTTT GAACAATAAA CAGGAGGCTG GTACCTGTAT CCTTACAGGT
AAACCGTCTA CTCAGCGTGT TCTTTTTGCA CGTGCTTATT AA
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| Protein sequence | MSKEITARSE DYSQWYNDLI IKGGLADYSA VRGCMVIKPY GFGLWEGMRD VLDAKFKETG
HQNAYFPLFI PKSFLSKEAE HVDGFAKECA VVTHHRLMQN PDPNVKGLVV DPEAKLEEEL
IVRPTSETII WNTYKDWIQS YRDLPLLINQ WANVVRWEMR TRLFLRTAEF LWQEGHTAHA
TAEEAIAETR QMLEVYADFA ENYMALPVVR GVKSPAERFA GALDTYCIEA LMQDGKALQA
GTSHFLGQNF AKAFDVKFSN KENKQEYVWA TSWGVSTRLI GALVMAHSDD DGLVLPPRIA
PLQVVIVPIY KGEEQKSKID AKVDEIISGL KKLGIRVKYD DSDNARPGWK FAEYEMKGVP
VRIALGARDL ENNVAEVARR DTKTKESLSL DGLAERISAL LEEIQSQMYN KALTFRDEHI
TPANTMEEFE RLLDEKAGFI SAHWDGTTET EEKIKELTKA TIRCIPLNNK QEAGTCILTG
KPSTQRVLFA RAY
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