| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5916 |
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| Symbol | |
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| ID | 8362097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7508476 |
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| End bp | 7509897 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968055 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_003125535 |
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| Protein GI | 256424882 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00612207 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAAC AGGTTACAAA AGTGCATGAC GAAAGTCGCC AGGGCGAGGC TTACGCGCCT
GTGGCCGGAG AATCACAGAC TTATACAAAA AAATTCTATA TAGAGAGCTA TGGTTGCCAG
ATGAACTTCA ACGATAGTGA GATCGTGGCA TCCATTCTGA AAGAAGAAGG CTTCGGTCCT
ACCCGTAACG TGGAGGAAGC GAGCCTGGTA TTATTAAATA CCTGTTCGAT CCGCGAAAAA
GCGGAGACGA CTGTACGCAA ACGCTTAACA GAATTCCGTA AAATAAAACA GCGTAACCCG
GAACTCCTGG TGGGAGTATT GGGCTGTATG GCTGAACGAC TGAAGGCCAA ACTGCTGGAA
GAGGAAAAAC TGGTAGACAT GGTAGTAGGT CCTGATGCCT ACAGAACATT ACCGGCCCTC
ATTGAAGAAG CAGAAACCGG TCAGAAAGCC GTGAACGTAC TGCTCAGCCG CGAGGAGACT
TACGGCGATA TCAGTCCGGT AAGACTGGAC AGTAATGGCG TTACTGCCTT CGTATCCATT
ATGCGTGGCT GTAACAACAT GTGTTCCTTC TGTGTAGTAC CGTTTACCCG CGGCCGTGAA
CGCAGCAGGG ACAAAGCGTC TATTCTCCAG GAAGCAACCG ACATGTTCAA CAGAGGCTAC
CGCGAGGTAA CACTGTTGGG GCAGAACGTG GATTCCTACT ACTGGGTAAG CCCGGACAAT
GACAATGATA TCACCACCTT CGCCAATCTG CTGGAAGCAG TTGCCCTGAT CAGTCCACTG
CTCAGAGTAC GCTTCAGTAC CTCTCATCCG AAAGACATTA CCGATGATGT GCTGTACACC
ATGGCGAAAT ACGAGAACAT CTGCAAATAC ATTCACCTGC CGATGCAGAG TGGAAGTACC
CGCATACTGC AACTGATGAA CCGTACTTAC ACCAGGGAAT GGTACATCAA AAAGGTTGAC
CGCATCCGCG AAATACTGCC AGGTTGTGCA TTGTCCACCG ACGTGATCAC CGGCTTCTGT
ACAGAAACAG AAGAAGATCA CCAGGATACC ATGACATTGA TGGATTATGG CCAATACGAC
CTCGCCTATA TGTTCTTCTA TTCCGAACGT CCCGGTACAC TGGCTGCACG CCGTTACCAG
GATGACGTGC CGGAAGAAGT GAAGAAACGG AGGCTGTCAG AAATAGTGGA CCTGCATCGC
GCACAATCAC TGAAAAGTAT GCAGCAGGAT GTTGGTAAAA CGTTTAAAGT GCTGATCGAA
GGCGTTTCAA AACGTTCCGA AGATCAACTT TTTGGCAGAA CAGATCATAA TAAGGTAGTG
GTATTCCCGA AAGAGGATTT CCGTAAAGGG GAATATATCT GGGTGAAGGT AGAGGATTGT
ACTGCCGGCA CTTTACTGGG AACTTCGACA GGGCGAGCTT AA
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| Protein sequence | MLEQVTKVHD ESRQGEAYAP VAGESQTYTK KFYIESYGCQ MNFNDSEIVA SILKEEGFGP
TRNVEEASLV LLNTCSIREK AETTVRKRLT EFRKIKQRNP ELLVGVLGCM AERLKAKLLE
EEKLVDMVVG PDAYRTLPAL IEEAETGQKA VNVLLSREET YGDISPVRLD SNGVTAFVSI
MRGCNNMCSF CVVPFTRGRE RSRDKASILQ EATDMFNRGY REVTLLGQNV DSYYWVSPDN
DNDITTFANL LEAVALISPL LRVRFSTSHP KDITDDVLYT MAKYENICKY IHLPMQSGST
RILQLMNRTY TREWYIKKVD RIREILPGCA LSTDVITGFC TETEEDHQDT MTLMDYGQYD
LAYMFFYSER PGTLAARRYQ DDVPEEVKKR RLSEIVDLHR AQSLKSMQQD VGKTFKVLIE
GVSKRSEDQL FGRTDHNKVV VFPKEDFRKG EYIWVKVEDC TAGTLLGTST GRA
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