| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5912 |
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| Symbol | |
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| ID | 8362093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7504675 |
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| End bp | 7505547 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644968051 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003125531 |
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| Protein GI | 256424878 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.264328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAAA AGGCATTTCC GGTATACGAT GTAAGTACGC TCACAGGGTA TAAACATGAT
GATATTCAGA TCAGCAGATT TGCGCCTTAC CTCAGTGTGC ATGAGAATCT TCGTGATGCG
CACAAACATA ATTTCTATCA TGTTACTTTA TTCACCGAAG GCGCCGGTAC GCATACGATC
GACTTCAAAA CCTTCACTGT AAAGCCTTAC CAGATTTATT TCATGATTCC TGGTCAGGTG
CACAGCTGGC AGTTTGAAGG AAAAGTAGAC GGCTATATCA TCAACTTTTC ATTTAATTTC
CTGCAGTCGC TCTTACAGAA ACCTGATTAT CTTGAGCAGT TTCCTTTCTT TACCGGTGAT
GTTGATGAAG CGGTCATCAA CCTGCCGGAA CAGCTGCATA CGCCTATCAC AAGGATCTTT
GAAGAACTGA TCCGGGAGAT TGAACAGCCC GCAGATATGT CTGTGGATAT GATACAGGTA
CTGATGTTGC AGGCGTTTAT TCTGATCGGA AGACTCAGTT TTGAAAAGTC GCCGGTGCCG
TCGAATAACT ACAATTATAT CCTGCTGAAG AATTTTCAGA AACTGATTGA GAAGAATTAT
ACCACATTGA AGTTGCCCAG AGAGTATGCA GAATTACTCT TCATTACCCC TAATCATTTA
AATGCATTGT GTAATAGTAC GGTGGGTATG TCCGCAGGAG AACTGATCCG TAACAGGATC
ATACTGGAGG CAAAAAGATT GCTTGTGAAC AAAGACTCTA CTATCACTGA AATAGCGTAT
CAGCTGGGTT TTGCAGATAA TTCTTATTTC ACTAAATTTT ATAAGAAGTA CACGGGACAA
ACACCTGAAG AGTTCAGGAA AAGCCTCCGT TAA
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| Protein sequence | MVKKAFPVYD VSTLTGYKHD DIQISRFAPY LSVHENLRDA HKHNFYHVTL FTEGAGTHTI
DFKTFTVKPY QIYFMIPGQV HSWQFEGKVD GYIINFSFNF LQSLLQKPDY LEQFPFFTGD
VDEAVINLPE QLHTPITRIF EELIREIEQP ADMSVDMIQV LMLQAFILIG RLSFEKSPVP
SNNYNYILLK NFQKLIEKNY TTLKLPREYA ELLFITPNHL NALCNSTVGM SAGELIRNRI
ILEAKRLLVN KDSTITEIAY QLGFADNSYF TKFYKKYTGQ TPEEFRKSLR
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