Gene Cpin_5901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5901 
Symbol 
ID8362082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7496297 
End bp7496680 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content35% 
IMG OID644968040 
Producthypothetical protein 
Protein accessionYP_003125520 
Protein GI256424867 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.670608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCCCT TCCAGGATGC TATGATACAA ACTACCGGCC TGCATTCTAC ATTTGATAAG 
AGAATCGCAT GCAAAGGAAG CCGCATTGTC AGGGAGAAAA CCTATAATTA TTTCTATAAT
CCGATGTGGA GCTTTTACGG AGAATATGGG AAAGGAGATG TTAACGGTAC ATATTACAAG
CCGGTAAACA AGCCTGTTGA TTTTGGCTGG AATATGTTTG ATCAGGTGCT GGTGAGACCA
TCATTACTTG CAAATGTGTT CGATGAATCA AGTTTAAAAA TTATAACCCA GATAGGTTCT
GTGAATTTAT TAAATAACAA TAATGTTATA AAAAAAGGGT TAAGTGATCA CTTACCAATT
GAATTTAATT TAAACAATAT TTAA
 
Protein sequence
MNPFQDAMIQ TTGLHSTFDK RIACKGSRIV REKTYNYFYN PMWSFYGEYG KGDVNGTYYK 
PVNKPVDFGW NMFDQVLVRP SLLANVFDES SLKIITQIGS VNLLNNNNVI KKGLSDHLPI
EFNLNNI