Gene Cpin_5897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5897 
Symbol 
ID8362078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7489968 
End bp7490750 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content46% 
IMG OID644968036 
Producthypothetical protein 
Protein accessionYP_003125516 
Protein GI256424863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGT TTTCTGTCAG AAAAATGTTT ACCGGCAAGA CAGAGAAGAA AGTAACGGTA 
CATGACCCGA ACATCTATAC TGTTACGTTA ACCTATCACG GAGATGCCGA TACACGCCTA
AAATTCAATA CGGAGATCAG CCGGATGACA GTCGGCGATG ATACCACTCA GTATTTCCAG
ATCACCCGGT CTGATGTCAG GGTCAATGAT GAAGATACTG CTGATTACAT CGCTTCCGAT
CTGGCGGCTC AATGTGGTAA CGTACTCTAT CCCCTGCAGG TACAAGTCGG ACAAGATGGT
ACAATGCAGT CCATCCTCAA TCATCCTGAA ATACTGCAAC GCTGGGAAGA GAAGAAAATC
CGGTTAAAAC AATATTTCAC CGGACCGGAA GCACATGATT ATATCGACGC TACCGGCGAT
ACACTCGGAC AGGCAAATAC CTTGCTGAAC GCTATCAGAC AGGATATCTT CCTCTCCGCC
TACTTCCAGG TGCAATGTGC CGGTAACCGG GATAGTTTCA AAACTTCCTA TTACCTGTTT
CCTTTTGAAG CCCCTGTTGT ATATGATGTA ATCCCTACGG GTAACAGGAT GATGAATAAT
CTCCGGCAAA CCGGAAAGGA AGAAACAGGA AACGGTAAGC TCGAAATAAA ATACACTTTT
CACAAAATAC ATGGTCTGAT TCAGTCATTG CAGGCGCAAT TGGACGCAGA GAGAGGAAAA
CAGGCCGCTC AGATAACGCT GACAGCCTCC TGCATCAATA GCGACGATCA TCGTATAAAC
TAA
 
Protein sequence
MPLFSVRKMF TGKTEKKVTV HDPNIYTVTL TYHGDADTRL KFNTEISRMT VGDDTTQYFQ 
ITRSDVRVND EDTADYIASD LAAQCGNVLY PLQVQVGQDG TMQSILNHPE ILQRWEEKKI
RLKQYFTGPE AHDYIDATGD TLGQANTLLN AIRQDIFLSA YFQVQCAGNR DSFKTSYYLF
PFEAPVVYDV IPTGNRMMNN LRQTGKEETG NGKLEIKYTF HKIHGLIQSL QAQLDAERGK
QAAQITLTAS CINSDDHRIN