Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5897 |
Symbol | |
ID | 8362078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7489968 |
End bp | 7490750 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968036 |
Product | hypothetical protein |
Protein accession | YP_003125516 |
Protein GI | 256424863 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTGT TTTCTGTCAG AAAAATGTTT ACCGGCAAGA CAGAGAAGAA AGTAACGGTA CATGACCCGA ACATCTATAC TGTTACGTTA ACCTATCACG GAGATGCCGA TACACGCCTA AAATTCAATA CGGAGATCAG CCGGATGACA GTCGGCGATG ATACCACTCA GTATTTCCAG ATCACCCGGT CTGATGTCAG GGTCAATGAT GAAGATACTG CTGATTACAT CGCTTCCGAT CTGGCGGCTC AATGTGGTAA CGTACTCTAT CCCCTGCAGG TACAAGTCGG ACAAGATGGT ACAATGCAGT CCATCCTCAA TCATCCTGAA ATACTGCAAC GCTGGGAAGA GAAGAAAATC CGGTTAAAAC AATATTTCAC CGGACCGGAA GCACATGATT ATATCGACGC TACCGGCGAT ACACTCGGAC AGGCAAATAC CTTGCTGAAC GCTATCAGAC AGGATATCTT CCTCTCCGCC TACTTCCAGG TGCAATGTGC CGGTAACCGG GATAGTTTCA AAACTTCCTA TTACCTGTTT CCTTTTGAAG CCCCTGTTGT ATATGATGTA ATCCCTACGG GTAACAGGAT GATGAATAAT CTCCGGCAAA CCGGAAAGGA AGAAACAGGA AACGGTAAGC TCGAAATAAA ATACACTTTT CACAAAATAC ATGGTCTGAT TCAGTCATTG CAGGCGCAAT TGGACGCAGA GAGAGGAAAA CAGGCCGCTC AGATAACGCT GACAGCCTCC TGCATCAATA GCGACGATCA TCGTATAAAC TAA
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Protein sequence | MPLFSVRKMF TGKTEKKVTV HDPNIYTVTL TYHGDADTRL KFNTEISRMT VGDDTTQYFQ ITRSDVRVND EDTADYIASD LAAQCGNVLY PLQVQVGQDG TMQSILNHPE ILQRWEEKKI RLKQYFTGPE AHDYIDATGD TLGQANTLLN AIRQDIFLSA YFQVQCAGNR DSFKTSYYLF PFEAPVVYDV IPTGNRMMNN LRQTGKEETG NGKLEIKYTF HKIHGLIQSL QAQLDAERGK QAAQITLTAS CINSDDHRIN
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