| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5894 |
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| Symbol | |
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| ID | 8362075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7486217 |
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| End bp | 7488064 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968033 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_003125513 |
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| Protein GI | 256424860 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGT ACACTCAAAC CGCCGTGTCA ATTGGGGATG AAGAATTCAA GCAATTCCAT
GCACTGTCTC TTAAACAATC CATGGATGGA CACCATGAAC TCAAACTCAG TATTGGTTAC
GACTGGCTGT TAAGAACAGG TAAAGACCCT GTATCCTCCG GTAAGTCCTT CTTAGGCAAG
GAATTACGTA TGTCCGTTCA GGCGATAGAG GGTAGTAATG ACCTTAAACC GCTCTTTTTC
AATGGTATAG TCAGTTCAGT GACCTTTGGC AAAGCCAGTA ATGGCATCAA CGGACACTGT
ACCATCATCG CTACCAGCCC GACCGTCCTC CTGGATGGTA ATCCGCATAT ACAGTCCTAT
GAACAACAGG ACCTTGCGGC TATCGCTGGT GCCGTGGCGA AATCCAGCAG CGCTTCTCCC
GGCGGACTGG AAATCAATCC CGCCTATAGC GGCAAACTTA AGTATATCGT ACAGTACCGG
GAAACCGGTT ACAAATTCCT GCAACGCCTC GCTCAACGCT ATGGTGAATG GTTCTTCTAC
AATGGTCAGC AAATCATTTT CGGGAAATAT AGCCCGCAGA AAACCATTCT GTATCACCAG
GTCAATCTCG TCGATTTCAG TCTGACCCTG CGCACACTTC CCAACAGGAT TGCCCTTAAA
GGAATGGAAT ACCGCCAGTA CTCCTTCGTG GAAAACAACA CCGGCAGTAT AGCCGAAGGC
GGTGTAGACA GTCTGACCCA ACACGCCCAG GCACAAAGCG ATAAATTATA TACCAAACCT
TCCCAGTATA AACTCCCCTA CGCTTTCAGC AGCAATGCCA AAGAAGAACT GGAACTGCTG
ACTAAACGCC AGAAACAGGC CCAGATGTCT CAAATGGTCG TAGTAACGGG AAAAAGCAAG
AGTACCGCCC TGCGATTAGG CGATACCATC AGCATACAGG AAAATATCTT CTCCAACGAA
GATCATGGCG AATATATGGT CACCGCCCTG GAACACTATT GTGATGGTAA CGGTGAATAC
CATAACCTCT TTGAAGGAAC GCCTGTAGCT GCAGCCGTAC CTCCGCTGGA CCTGGACAAC
TACCCTTTTG CGGAAGCCCA GAGCGCTACT GTCGTAGAAA ACTTCGATCC GAAAGGATTG
GGACGTATAC GCGTAAGATT CAGCTGGCAG AATGGTACTT CTCCCTGGAT CCGCCTGATG
CAACCACATG GAGGCGGCGA TAAAGGCTTC TATTTCATTC CCGAAGTAGG CGAAGAAGTA
TGGGTAGATT TTGAAGGAGG GAATCCGGAA GCGCCTTTCG CCACCGGCGC CGCTTACAAT
GGCACTGCGA AGACCAACTT CGGTGATACC ATGAACAATG TAAAAGTGAT CAGTACCCGC
AGCGGACATA CCATCAAACT GGATGATTCC AGCGGACAGG AATTTATCAC AATTGCAGAT
AAAGGTGGTA ATACGATTGT CATGGATACC AACGGACAAA ACATCTCCAT CTCTGCCCAG
GAACATATCA GCATCAATGC CCGTAATATT ACCTTCCAGG CCACAGAGAG TATCGACGTC
AATGCAGGTA TGCATATCAC GAATGCTGCC GGTATGAATA TGACCCACTC CGCAGGCATG
AATATACTGC ACAATGCAGG CGATAGCATG AGCCAGTACT CCGTAAATGA CTACCGGCTG
AGTGCTACCA ACATTACAAA AATCGCCATG GAAAACATGG ATGTGCAGGC AAAGAAAATT
GAGAAGACCG CCGAGCAGAT GAAGGTAGAC AGCTCAAAAG AAGAGATGAC TATCAACTCC
GGCAAGTCTG TTGCCATCAA GAGCGCAGAG AAATCCAAAT TGTTCTGA
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| Protein sequence | MALYTQTAVS IGDEEFKQFH ALSLKQSMDG HHELKLSIGY DWLLRTGKDP VSSGKSFLGK
ELRMSVQAIE GSNDLKPLFF NGIVSSVTFG KASNGINGHC TIIATSPTVL LDGNPHIQSY
EQQDLAAIAG AVAKSSSASP GGLEINPAYS GKLKYIVQYR ETGYKFLQRL AQRYGEWFFY
NGQQIIFGKY SPQKTILYHQ VNLVDFSLTL RTLPNRIALK GMEYRQYSFV ENNTGSIAEG
GVDSLTQHAQ AQSDKLYTKP SQYKLPYAFS SNAKEELELL TKRQKQAQMS QMVVVTGKSK
STALRLGDTI SIQENIFSNE DHGEYMVTAL EHYCDGNGEY HNLFEGTPVA AAVPPLDLDN
YPFAEAQSAT VVENFDPKGL GRIRVRFSWQ NGTSPWIRLM QPHGGGDKGF YFIPEVGEEV
WVDFEGGNPE APFATGAAYN GTAKTNFGDT MNNVKVISTR SGHTIKLDDS SGQEFITIAD
KGGNTIVMDT NGQNISISAQ EHISINARNI TFQATESIDV NAGMHITNAA GMNMTHSAGM
NILHNAGDSM SQYSVNDYRL SATNITKIAM ENMDVQAKKI EKTAEQMKVD SSKEEMTINS
GKSVAIKSAE KSKLF
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