Gene Cpin_5885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5885 
Symbol 
ID8362066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7478711 
End bp7479208 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content46% 
IMG OID644968024 
Productphosphoribosyltransferase 
Protein accessionYP_003125504 
Protein GI256424851 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTA AGAACGTGAT CCTGACCCAG GATGTGATAG AGAAGAAGAT CAAACGTATC 
GCCTACGAGA TCTATGAACA TAACAGTGAT GAACAGGAAA TTATCATTAC AGGGATCTGG
GACAGGGGAA TGATACTGGC GGAGAAAATT ACAAAGATCC TGCAGGAGAT ATCTCCCTTG
CAGATCAAAT TACTGCGTCT GGACCTGAAT AAACAACGTC CTGAGGGAGT AACGCTCTCC
GAAGAAATAG ATTTCAATGG AAAAGTGATC GTACTGGTCG ATGATGTGGC CAACTCCGGA
CGTACCATGC TGTACGCCCT GAAACCTTTC CTGCAGTTCC TGCCCAGAAA GATCCAGACC
GCCGTACTGG TGGATCGTAA GCATAAATCT TTCCCTTTAT CAGTTGATTT CGTGGGTTAT
TCCCTGGCAA CGACCCTGCA GGATATGGTG ATGGTGGAAA TGGAAGAGGA AGAGATCAAA
TCTGCCTATC TCGTGTAA
 
Protein sequence
METKNVILTQ DVIEKKIKRI AYEIYEHNSD EQEIIITGIW DRGMILAEKI TKILQEISPL 
QIKLLRLDLN KQRPEGVTLS EEIDFNGKVI VLVDDVANSG RTMLYALKPF LQFLPRKIQT
AVLVDRKHKS FPLSVDFVGY SLATTLQDMV MVEMEEEEIK SAYLV