Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5876 |
Symbol | |
ID | 8362056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7468919 |
End bp | 7469257 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644968014 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003125495 |
Protein GI | 256424842 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.1561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.496551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAGA TAGGCAGTAC AGAGTTTCAA TGTCCCTCAG ATGTCTTTTT GCAGATCATT AAAGGGAAGT GTAAAACCAC CCTGATCGTC CTGATCAAAA AAGGCAGAAA CAGGTTTGGA GAAATGCGCA GGACATTACC CACTATCAGT GAGCGGATGT TATCAAGACA ACTGGACGAA CTGGAAAAAG ACGGAATCAT CCGCCGGGAG AGTTTTCCGG AAGTGCCGCC CCGGGTAGAA TACTTTCTGA CGCCTTATGG AGAGACGATT TATCCGATTA TCCGGGAGAT GCGCAAATGG GGATATATCC ACCTTGAAAA GCAACAATCT GATGTATAA
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Protein sequence | MEEIGSTEFQ CPSDVFLQII KGKCKTTLIV LIKKGRNRFG EMRRTLPTIS ERMLSRQLDE LEKDGIIRRE SFPEVPPRVE YFLTPYGETI YPIIREMRKW GYIHLEKQQS DV
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