Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5811 |
Symbol | |
ID | 8361991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7384158 |
End bp | 7385267 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644967950 |
Product | hypothetical protein |
Protein accession | YP_003125431 |
Protein GI | 256424778 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.501134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00746565 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAACG GACCAACAGT ATTGATAGAA CAGGCGAACA GCCGCTACAC GATGTATGCG GTGGTAGAGC AGGACGAACG GACAGCTTAT TTTTACCTGT ATCCTGCTGA ATTGCAGAGC AAAAAATACC GGATGCGTGC CTGCTGGCTG CGCAATATTC AACCGGGACC TGCTAAACGC GACAGTGCAG CCATGGCAAA TGGAGATGCA CCTATGCTGG AAGCACACTT TAGTAATCAT CCGGAAGGCA AAGAGCCTTT AAAAGCGGAA TTAGTGTCTG TCGTATGGAT GCCGGAAGAT GACGGCGCCG CTGTATTGTA CGATGGGAAA ACGCTGGGTG TTATTCCCGG ATGGAGCCTT TATGCAGATG AACCTGCGGC CTATGCGGCA GATTGTATAA ATGCAGATGG TAATGCCATC GTATTCCCAT TAGGTGAGTT GGGCAAGAAC GAACAGCATA CGCGTGTAGC AGAAGCGGTG CGTTTCCGTG AAGCATGGGA TGATACCGAA GCGCCGCAAT GGCCGGTGAT TCAGCAACAG TTTATTGCTA CTTACGAATC ACATTTCGGA GAGATAAAAC AATACTTTGC GATCGACAAT AACCAATGGC CGCCAATGGC ATTGGGTAAG TTTGAAAAGG ATAACATCGT TTACTTCCTT ACCATGGGTG TCAGCATTCG TCCTATGCCA TGGGTGTCTT ATCTGTATAA TGATAATGCA TCTGCATACA GAAGAATGGA ACTGGCGATG GCTATCAGCA AAGATGATTT TAGTGAAGAA GAGATCATGA AAATGGCGGA AGGATTGTCC AGTATGGCAG ATATTCCATG GAGACATATC AGCTGGCTTG GAGAAGGACA TACAATTGCT TCCAGCAAAC TGCCGGCTCC TTTTGAAAGT ATTGTATTGT CTGCCGCACT GTATAATGGT GAAAGTATTG CATTACCGGA GATGTACGGT GATAAGGTGA ACCTTTTCTG GGTAAGCCCT GTGACACTCT CTGAAAGACA GTTCGCACAT GAGAAAGCAA ATGGCGGATA TGAGTTGCTG GAGAAAATGA TTCAGGAAGA TATTACGCAT ATTGTGACGA AGCGGGAGGC GATCGTTTAA
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Protein sequence | MSNGPTVLIE QANSRYTMYA VVEQDERTAY FYLYPAELQS KKYRMRACWL RNIQPGPAKR DSAAMANGDA PMLEAHFSNH PEGKEPLKAE LVSVVWMPED DGAAVLYDGK TLGVIPGWSL YADEPAAYAA DCINADGNAI VFPLGELGKN EQHTRVAEAV RFREAWDDTE APQWPVIQQQ FIATYESHFG EIKQYFAIDN NQWPPMALGK FEKDNIVYFL TMGVSIRPMP WVSYLYNDNA SAYRRMELAM AISKDDFSEE EIMKMAEGLS SMADIPWRHI SWLGEGHTIA SSKLPAPFES IVLSAALYNG ESIALPEMYG DKVNLFWVSP VTLSERQFAH EKANGGYELL EKMIQEDITH IVTKREAIV
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