Gene Cpin_5811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5811 
Symbol 
ID8361991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7384158 
End bp7385267 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content47% 
IMG OID644967950 
Producthypothetical protein 
Protein accessionYP_003125431 
Protein GI256424778 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.501134 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00746565 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAACG GACCAACAGT ATTGATAGAA CAGGCGAACA GCCGCTACAC GATGTATGCG 
GTGGTAGAGC AGGACGAACG GACAGCTTAT TTTTACCTGT ATCCTGCTGA ATTGCAGAGC
AAAAAATACC GGATGCGTGC CTGCTGGCTG CGCAATATTC AACCGGGACC TGCTAAACGC
GACAGTGCAG CCATGGCAAA TGGAGATGCA CCTATGCTGG AAGCACACTT TAGTAATCAT
CCGGAAGGCA AAGAGCCTTT AAAAGCGGAA TTAGTGTCTG TCGTATGGAT GCCGGAAGAT
GACGGCGCCG CTGTATTGTA CGATGGGAAA ACGCTGGGTG TTATTCCCGG ATGGAGCCTT
TATGCAGATG AACCTGCGGC CTATGCGGCA GATTGTATAA ATGCAGATGG TAATGCCATC
GTATTCCCAT TAGGTGAGTT GGGCAAGAAC GAACAGCATA CGCGTGTAGC AGAAGCGGTG
CGTTTCCGTG AAGCATGGGA TGATACCGAA GCGCCGCAAT GGCCGGTGAT TCAGCAACAG
TTTATTGCTA CTTACGAATC ACATTTCGGA GAGATAAAAC AATACTTTGC GATCGACAAT
AACCAATGGC CGCCAATGGC ATTGGGTAAG TTTGAAAAGG ATAACATCGT TTACTTCCTT
ACCATGGGTG TCAGCATTCG TCCTATGCCA TGGGTGTCTT ATCTGTATAA TGATAATGCA
TCTGCATACA GAAGAATGGA ACTGGCGATG GCTATCAGCA AAGATGATTT TAGTGAAGAA
GAGATCATGA AAATGGCGGA AGGATTGTCC AGTATGGCAG ATATTCCATG GAGACATATC
AGCTGGCTTG GAGAAGGACA TACAATTGCT TCCAGCAAAC TGCCGGCTCC TTTTGAAAGT
ATTGTATTGT CTGCCGCACT GTATAATGGT GAAAGTATTG CATTACCGGA GATGTACGGT
GATAAGGTGA ACCTTTTCTG GGTAAGCCCT GTGACACTCT CTGAAAGACA GTTCGCACAT
GAGAAAGCAA ATGGCGGATA TGAGTTGCTG GAGAAAATGA TTCAGGAAGA TATTACGCAT
ATTGTGACGA AGCGGGAGGC GATCGTTTAA
 
Protein sequence
MSNGPTVLIE QANSRYTMYA VVEQDERTAY FYLYPAELQS KKYRMRACWL RNIQPGPAKR 
DSAAMANGDA PMLEAHFSNH PEGKEPLKAE LVSVVWMPED DGAAVLYDGK TLGVIPGWSL
YADEPAAYAA DCINADGNAI VFPLGELGKN EQHTRVAEAV RFREAWDDTE APQWPVIQQQ
FIATYESHFG EIKQYFAIDN NQWPPMALGK FEKDNIVYFL TMGVSIRPMP WVSYLYNDNA
SAYRRMELAM AISKDDFSEE EIMKMAEGLS SMADIPWRHI SWLGEGHTIA SSKLPAPFES
IVLSAALYNG ESIALPEMYG DKVNLFWVSP VTLSERQFAH EKANGGYELL EKMIQEDITH
IVTKREAIV