| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5729 |
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| Symbol | |
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| ID | 8361909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7291286 |
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| End bp | 7291933 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967870 |
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| Product | hypothetical protein |
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| Protein accession | YP_003125351 |
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| Protein GI | 256424698 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.86097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.628566 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTTA TCATCACAGG TGCGACTGGT TTTGTGGGAG AGGGCGTTTT GCTGGAATGT
CTCCGCAATA ATAATGTCAG TGCAGTATTA ATGGTGAATC GAAAGCCTTC GGGCATACAA
CACCACAAGC TCAGGGAGTG TATTGTGACT GATTTTATGG ATCTGAGTGC AGTAAAACCC
CAGCTCATCG GATATGATGC CTGTTTTTAC TGTGCGGGTA TCAGTTCGGT AGGTCTGACA
GAAGAAGTAT ACACCCATAT CACCTATGAT CTGACCATTA ATTTTGCAAA GGTCATGCTG
TCATTGAATC CTGATATGGT GTTCAATTTT GTATCTGGTA GTCATACGGA TGCGTCTGAA
AAGGGAAAGC TCATGTGGGC GCGTGTGAAG GGGAAAGCAG AGAATGCTTT GGGAAAGATG
CCATTTAAGG CGCAATACAA TTTCCGTCCC GGGTTTATGA AGCCGACGAA GGGACAGCAG
AACGTAAAGA CCTTTTATAA GATTATCGTA CCGATATTCC CTTTATTGTT CCCTTCTCAA
TCCTGTACCC TCCGGGAAGT AGGACTATCC ATGATCAATG CTACACTGAA AGGATCTGCA
GTACGTACGC TGGAAATAAG TGACATCAAA CGCCTGGCAG TAGCATAA
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| Protein sequence | MKVIITGATG FVGEGVLLEC LRNNNVSAVL MVNRKPSGIQ HHKLRECIVT DFMDLSAVKP
QLIGYDACFY CAGISSVGLT EEVYTHITYD LTINFAKVML SLNPDMVFNF VSGSHTDASE
KGKLMWARVK GKAENALGKM PFKAQYNFRP GFMKPTKGQQ NVKTFYKIIV PIFPLLFPSQ
SCTLREVGLS MINATLKGSA VRTLEISDIK RLAVA
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