| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5638 |
|---|
| Symbol | |
|---|
| ID | 8361815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7187110 |
|---|
| End bp | 7188384 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644967779 |
|---|
| Product | adenylosuccinate synthetase |
|---|
| Protein accession | YP_003125263 |
|---|
| Protein GI | 256424610 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0104] Adenylosuccinate synthase |
|---|
| TIGRFAM ID | [TIGR00184] adenylosuccinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0744769 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.421988 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG ATATTGTTTT AGGTCTTCAG TGGGGAGACG AAGGAAAAGG TAAGATCGTG
GATGTCCTTG CACCTGCATA TGGTATGGTA GCCCGTTATC ACGGTGGTTC GAATGCCGGC
CATACAATTG TTTTTGAAGG AAAGAAAATG GTCCTCAATA CGGTACCCTC GGGTATATTC
AATCAACAGA CGGCCAATAT TATCGGCAGC GGTGTGGTAC TGGATCTGCT GGCCTTTCAT
AAAGAAGTAA CAGGTTTACA GGCAAACGGA TTTACTGTTG CCGAATGGCA GAACCTGTCC
ATCTCACGCA AGGCACATCT CTTACTGCCA ACACACCGTC TCATAGACAA ACTCTCTGAA
GAGTCCCTGG GACTGCAAAA GATCGGTTCT ACACAGAAAG GTATCAGTCT GGCGTATGCG
GATAAAATGT TACGTCGTGG ATTACGCGCC GGAGATATCC TCTTACCGGA TTTCGAAGAA
AAGTGTAAAG AGCTGTTATC GGCACATACA CAACAGATAA AGACACACTA TCAACAAGAC
ATAGATACAG ATACATTATA TGCGGAAATA CAGGAGGCAC TGAAAACCGT ATTATTATTC
CCCATTATCG ATACAGAATC AGGTGTTAAT CAATATCTCT GCAAGGGTGG TAAAGTACTG
GCAGAAGGCG CACAGGGCAC ATTGCTGGAT ATAGATCATG GTACTTATCC GTATGTCACT
TCTTCCAGCA CAACAGCAGC AGGCGCCTGT TCCGGCCTGG GTATCGCACC ACAGAAAGTC
GGCGAGGTAT ATGGCATCTT CAAAGCGTAT ACGACACGTG TAGGCAATGG TCCTTTTCCC
ACAGAACTCA CCGATGAAAC AGGGACATTA CTCCGTACAA AAGGCCATGA ATTCGGCGCT
GTCACCAAAC GTCCGCGACG CACAGGATGG CTGGATATTC CTTATCTGAA ATATGCGATA
ATATTGAATG GTGTTACACA ACTGGTTTTA ACGAAACTGG ATGTACTACA GGGAATGGAA
CAGATTGCAG TATGTACACA TTACAGCGAA ACAGATGGCA TATCACTACC GCCATATACG
GCAGATGTAA CACCTGTTTA TCAGGTACTG AAAGGCTGGA ATGAAGACCT GACGGGCATC
CGCAGTAAAG ATGAATTACC TGCAGCATGT CTTGCATACA TTGCATTCCT GGAAGCGCAA
CTACAGCTGC CTGTCCGTTA TATATCAGTA GGCCCAGACA GAGAGCAGAT GATTGTGGTT
CCCTTTCCAG ATTAA
|
|---|
| Protein sequence | MKLDIVLGLQ WGDEGKGKIV DVLAPAYGMV ARYHGGSNAG HTIVFEGKKM VLNTVPSGIF
NQQTANIIGS GVVLDLLAFH KEVTGLQANG FTVAEWQNLS ISRKAHLLLP THRLIDKLSE
ESLGLQKIGS TQKGISLAYA DKMLRRGLRA GDILLPDFEE KCKELLSAHT QQIKTHYQQD
IDTDTLYAEI QEALKTVLLF PIIDTESGVN QYLCKGGKVL AEGAQGTLLD IDHGTYPYVT
SSSTTAAGAC SGLGIAPQKV GEVYGIFKAY TTRVGNGPFP TELTDETGTL LRTKGHEFGA
VTKRPRRTGW LDIPYLKYAI ILNGVTQLVL TKLDVLQGME QIAVCTHYSE TDGISLPPYT
ADVTPVYQVL KGWNEDLTGI RSKDELPAAC LAYIAFLEAQ LQLPVRYISV GPDREQMIVV
PFPD
|
|---|
| |