Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5591 |
Symbol | |
ID | 8361768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7141617 |
End bp | 7142249 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644967735 |
Product | protein of unknown function DUF1470 |
Protein accession | YP_003125219 |
Protein GI | 256424566 |
COG category | [R] General function prediction only |
COG ID | [COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.166159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.646492 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAAGG AAAGATCAAT AGCAACATTA TCCCTGGATG GCGGCGCCCT CTGTTTCCAT TTTATCAATA CGGTAAATGC ATGGAGAGGC ATCAACCTGC ATGAATACCT GGGCAGCTAT CAGGAAGTCA TCGAATGGTG TAAAAAGGTG GACATCCTTG ATGAAGCACA ACGCAGCGCC CTCTTACAGG AAGCTGCGAA GGATGAAACG GCTGCCGGCC TCGCCCTGCA GAAACTGAAG AAAACAAGAG AAACGCTGTA TCAGTTCTTT TCCGGTATCG CGGAAAATGA TGGCAGCACA CTGACTGCCG GTGTATTGGA GAAATTCAAT AAAGCACTGA GTAGCGGACT ATCTAAACTT CAGTTTGAGT CCTCCCCTAC AGGTATACGT GCCATCCTGA AACAGGAATA TGCCGACCTC CTTACACCCT TATGGACGGT GATGAAATCG GCCTACGACG TACTCACTAC GGAAGAGCAT ACACGTATCA AAGAATGTGA GACCTGTGGA TGGATCTTTC TTGATCAGAC GAAAAACAAT AAAAAACGCT GGTGCAGCCC TAGTAGCTGT GGTACTGCCG ATAAATCCAA ACGCTATTAT CAGCGTAAAA AAGAACAGTC AGAAGAAGAA TAA
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Protein sequence | MSKERSIATL SLDGGALCFH FINTVNAWRG INLHEYLGSY QEVIEWCKKV DILDEAQRSA LLQEAAKDET AAGLALQKLK KTRETLYQFF SGIAENDGST LTAGVLEKFN KALSSGLSKL QFESSPTGIR AILKQEYADL LTPLWTVMKS AYDVLTTEEH TRIKECETCG WIFLDQTKNN KKRWCSPSSC GTADKSKRYY QRKKEQSEEE
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