| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5550 |
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| Symbol | |
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| ID | 8361727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7086031 |
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| End bp | 7087593 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967694 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003125178 |
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| Protein GI | 256424525 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.255381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.337883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TCTTCGCTTC CATTATAGCT ATCTCACTCT TTGCTGCCTG CAGCAAGGAT
TTCCTGGAGC GCTCTCCTGT TGACGAACAG ACAGAAACCT CCTTTTATCA GACTCCCGAT
CAGGCCCTGC AGGCACTGGT AGCAGTGTAC AATCAGCTTA ACATCGGCGA CTATGATAAT
ATTCACCTCG TGTCAGAACT GGCCAGTGAC AATTGCTTCG GCGGTGGTGG TACCTCTGAC
CTCGTCTGGA AACAATGGGA TCGCTTCCAG GAAGCATCCA ATATGAACCT GGGCCTCTGG
CAGAAATACT ATACGGGTAT CTACAGAGCG AATGTATTAT TGTCTAAAAT AGATGGTGTC
AACTGGGGTA CTGACAGTAC ACTGAAAAAC ACCTACGTCG CAGAAGCACG CTTCCTCAGA
GCTTACTTCT ATTTCGACCT GGCCCGCTTC TTCGGAAATG TTCCATTAGC CACCAAACCG
CTGACCGTAT CAGAATACAA CATGCCGCAG GCTACGCCGG CGGATGTATA CAAACAGATC
GCGGAAGACC TGAAATATGC AGCGGAGAAA TTACCTGCTG TGGCCTATCA GGGTATTCCA
ACCTCTAACT ACGGCCGCGT AACCAAATGG GCGGCACAGG CATTAATCGG TCGTGTATTC
CTCTATTATA CCGGCTATTA TAACCAGAAT GACCTGGCAG GTGTCGTGAC TAAAGCACAG
GCAGCCAGTT ACCTGGAAAA TATCATCAAT GCAGGTGGCT ATGGACTTGT AGACAGCTTC
CCGCGTTTAT GGCAGGCTTC TGCTGCTTCC TTTGTTGGTG AAGACAATAA AGAAACGATC
TGGTCGATCA AGTTTACGCA TAAAGGACTG GGTAACTGGG ATCAGCACAA TGGTAACCGT
ATGCAGGTAG ATATCGGCAT CCGTAGCCAG GTACTGAATC CTTACTACAA AGGATGGGGC
GCCGGTACCG TGAACAGCAA ACTGTGGAAT GCCTACGATG GCGCTGACAC CAGGAGAAAT
GCCTCTATCA TCTCTATTGA AGATGAAAAC CTGACAGCAT ATGCAATCGG TGATCAGTCA
CAATATACCG GCTACTTCTG GAAAAAATAT ATGCCACTTA ATGATGGCAA TGCGGATAGC
AAAGGTGGTA ATTTCCAGAT CGACAACTAT TTTGATGATG TTATCATCCG TTATGCAGAT
GTACTGCTAA TGGCAGCTGA ACTGAATCTG GGTACTGATC TGGGCAAAGC GCAGGGGTAT
TACAACCAGG TGCGTGACAG GGCTTTCCTG AATACCACCA GCAGAAAAAC GCTGACTGCT
ACCAACGGTA AAAGCCTGAT CATGGAGGAG CGCAGACTGG AATTTGCACT GGAAGGTTTA
CGCTACTGGG ACCTGCTGCG CCAGGGTATG AGCGTAGCAA AAGCTGCTAT CGACAACAGC
AGTTCAGATG CACAGTTCAA TGTCTCTTTC CGTACAGAAA CACAGGGACT TTTCAAAATA
CCAGAGCAGG AGATCAATCT CTCCAGCGGC GTTTACAGAC AAAATCCAGG ATGGGCTAAC
TAA
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| Protein sequence | MKKIFASIIA ISLFAACSKD FLERSPVDEQ TETSFYQTPD QALQALVAVY NQLNIGDYDN
IHLVSELASD NCFGGGGTSD LVWKQWDRFQ EASNMNLGLW QKYYTGIYRA NVLLSKIDGV
NWGTDSTLKN TYVAEARFLR AYFYFDLARF FGNVPLATKP LTVSEYNMPQ ATPADVYKQI
AEDLKYAAEK LPAVAYQGIP TSNYGRVTKW AAQALIGRVF LYYTGYYNQN DLAGVVTKAQ
AASYLENIIN AGGYGLVDSF PRLWQASAAS FVGEDNKETI WSIKFTHKGL GNWDQHNGNR
MQVDIGIRSQ VLNPYYKGWG AGTVNSKLWN AYDGADTRRN ASIISIEDEN LTAYAIGDQS
QYTGYFWKKY MPLNDGNADS KGGNFQIDNY FDDVIIRYAD VLLMAAELNL GTDLGKAQGY
YNQVRDRAFL NTTSRKTLTA TNGKSLIMEE RRLEFALEGL RYWDLLRQGM SVAKAAIDNS
SSDAQFNVSF RTETQGLFKI PEQEINLSSG VYRQNPGWAN
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