Gene Cpin_5471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5471 
Symbol 
ID8361648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6980731 
End bp6981708 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content48% 
IMG OID644967617 
ProductPhosphatidylinositol diacylglycerol-lyase 
Protein accessionYP_003125101 
Protein GI256424448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.427278 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.809521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC AACGTTTCAT GCCCGTTGCA GGAATTCTGC TGTCTACTGT ATTCTTTTCT 
GCATGTTCCA AAGAGGATGT CGTTCAACCG GCATCTACAC TTCGTGTTGA GAACGAAGTA
GCTGTAACAG TGCAAGCTGC AGCGGTGGCT ATGAACAGCT GGATGACCAG CCTGGCCGAC
AATACCAGCC TCGCCGCATT GTCTATCCCG GGTACACACG ACAGTGGCGC CCGTAATGAA
CCTGTATCCG GTACCGCAAA ATGCCAGGAC CTTACCATCG CACAACAGCT GGAAGCAGGT
GTACGTTTCC TGGACATCCG TTGCCGCCAC ATTGGTAACG CCTTCGCGAT CCACCATGGT
TCTATCTACC AGAACCTGAA CTTTGATGAT GTACTGGGCG CTTGTACCAG CTTCCTGGCA
GCACATCCGA AAGAAACCAT CGTTATGAGT GTAAAGGAGG AGTATGATGC TACCGACAAT
ACCCGTTCAT TCGAGCAGAC TTTCGACACT TATGTACAGA AATATTCCAG CTACTGGTCT
ACCGGCGCTA CTATCCCAAC CCTGGGACAG GTAAGAGGAA AGATCGTACT ACTGAGAAGA
TTTGGTGCGA CTTCCACACC TAAAGGTATC GAGGCTACCA GCTGGGCTGA TAACACAACT
TTCACGATCA ACAACAGCAA TGCTTCCCTG AAAGTACAGG ACCAGTACGT AGTGCCTGAT
AATAACGCAA AGTGGACAAA CGCTACTAAC CTGTTCACCG AGTCCAGCAC ACAGAGCAAC
AACACCCTGT ACATCAACTT TACCAGCGGT TACAAATCAC TGATCTTTAG TATTCCAAGC
ATCACGACTG TATCCAACGC GATCAATCCA AAGATCAATA CCTATTTCAC TACCAATACA
CATGGCAGAT ATGGTATTAT CCCGATGGAT TTTGTAAATG CGGACAGGGC ATCCCTGATT
GTAAATACTA ATTTCTAA
 
Protein sequence
MKTQRFMPVA GILLSTVFFS ACSKEDVVQP ASTLRVENEV AVTVQAAAVA MNSWMTSLAD 
NTSLAALSIP GTHDSGARNE PVSGTAKCQD LTIAQQLEAG VRFLDIRCRH IGNAFAIHHG
SIYQNLNFDD VLGACTSFLA AHPKETIVMS VKEEYDATDN TRSFEQTFDT YVQKYSSYWS
TGATIPTLGQ VRGKIVLLRR FGATSTPKGI EATSWADNTT FTINNSNASL KVQDQYVVPD
NNAKWTNATN LFTESSTQSN NTLYINFTSG YKSLIFSIPS ITTVSNAINP KINTYFTTNT
HGRYGIIPMD FVNADRASLI VNTNF