| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5463 |
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| Symbol | |
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| ID | 8361640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6972578 |
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| End bp | 6973630 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967609 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003125093 |
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| Protein GI | 256424440 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000752871 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAT TTCTGCTGCG TAAACTCAGT TATGGCATAC TGGTATTACT CGGAGTAGTG
GTGCTGGTAT TCTTCCTGTT CAACGTACTG CCGGGCGATC CGGCCAGGTT GACACTGGGA
CAGCGCGCAG ACGTTACATC GCTGGAAAAT GTAAGAAAGG AATTGCACCT GGATAAATCC
TTACCGGTGC AATTCCTTTT ATATTTAAAT GATCTTTCGC CGATAGGCAT ACATCCCTTT
GCCGCAGCCC AGGGTAATAT GCATTATCTG ACCCTGGCAC ATTTATCGGA AGAGCGCATC
CTGGTGCTGA AGACGCCTTA TCTGCGCCGT TCCTATCAGG GAAAAAAGGA AGTCTGGGAA
ATACTGACGG AGGCATTGCC CGGCACCCTG GTACTGGCTT TAGCCGCTAT GTTGTTTGCA
ACAATAGTAG GTATCGGACT CGGGGTATTA TCCGCAGTAA AACAAAATAC CTGGATGGAT
ACGGGCGCTG TTTTTGCCAG TGTGGTCGGC ATTTCTGCTC CCTCGTTCTT TATGGGTATT
GTGGTCGCTT ACCTCTTTGG ATTTGTCTTG AGTGATTATA CCGGCTTACA TATGACGGGC
AGTCTGTTTG AAACAGATGC TTTTGCCGGC CGCACGCTCA ATCTGCGTAA TCTGATATTA
CCTGCTATCA CCCTGGGGAT CCGTCCACTG GCCATCATTG TGCAACTCAC CCGCAGCGCC
ATGCTGGACG TACTCCATCA GGATTATATC CGTACGGCTT ATGCCAAGGG GCTACCTACC
CGGATTGTCG TGTTCAGACA TGCTTTACGC AATGCCTTAA ATCCCGTTAT TACAGCTATT
ACAGGCTGGT TTGCCGAACT GCTGGCCGGT GCATTTTTCG TGGAATATAT CTTTGGATGG
AAGGGGATCG GTAAGATTAC CGTGGATGCC CTGGAGAAGT TCGATTTCCC CGTACTGATG
GGATCTATCT TATTTACAGC CGGCATTTTT GTGCTTATTA ACCTGCTGGC TGACCTGCTG
TATACCATTA TTGATCCACG TATTAAGTTA TAA
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| Protein sequence | MFRFLLRKLS YGILVLLGVV VLVFFLFNVL PGDPARLTLG QRADVTSLEN VRKELHLDKS
LPVQFLLYLN DLSPIGIHPF AAAQGNMHYL TLAHLSEERI LVLKTPYLRR SYQGKKEVWE
ILTEALPGTL VLALAAMLFA TIVGIGLGVL SAVKQNTWMD TGAVFASVVG ISAPSFFMGI
VVAYLFGFVL SDYTGLHMTG SLFETDAFAG RTLNLRNLIL PAITLGIRPL AIIVQLTRSA
MLDVLHQDYI RTAYAKGLPT RIVVFRHALR NALNPVITAI TGWFAELLAG AFFVEYIFGW
KGIGKITVDA LEKFDFPVLM GSILFTAGIF VLINLLADLL YTIIDPRIKL
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