| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5454 |
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| Symbol | |
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| ID | 8361631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6965358 |
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| End bp | 6966071 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967600 |
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| Product | Tetratricopeptide domain protein |
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| Protein accession | YP_003125084 |
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| Protein GI | 256424431 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.525083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA CAACAAATAA GACCGCAGCT GAAAATACTC CTGCTCCTGT GTCTAAAGAA
TTCCAACTGG AAGACTCACT CCACAAAGCG GAAGACTTTT TCAACAAGAA CAAAAACAGC
ATTATCATCG CCCTGCTCGT AGTAGTGGTG GTAGTGGGCG GTACTTTTGC CTACAGCAAG
TTCATCAAAG GTCCTAACGA AACGAAAGCA CAGAACATGG TATTCCATGC ACAGCAGTAT
TTCGAGAGAG ATTCTTTCCG TCTGGCTTTA AATGGTGACG GTAACTATGA AGGTTTCCTG
CAGGTAATTG ATAAATACGG CAGCACCAAA ACAGGTCAGT TAGCAAAATA TTACGCTGGC
GTTAGCTATG TGAAACTGGG CGAATTCCAG AAAGGTGCAG ATCTGCTGAC AGCTTTCAAT
GGTGGCGATC AGGTTGTACA GGCAATGGCA TACGGTTTAG CCGGTGACGC TTACATGGAA
CTGAACCAAA CCGATAAAGG TATCGAATAT TATAAGAAAG CAGGTCATCA CAGCGATAAC
GAGCTGACAG CGCCAACTTA CCTGTTCCGC GCAGGTCTGG CTCTGGAAAA AGCAAACAAA
ACTGCTGATG CAGTTGCGAT CTACAAAGAA ATTCAAAGCA AATATCCTCA GACAGCTGAA
GGCCGTGAAA TTGAGAAATA TCTGGCGCGC CTGGGCGAAG TGAGAAGTAA TTGA
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| Protein sequence | MTETTNKTAA ENTPAPVSKE FQLEDSLHKA EDFFNKNKNS IIIALLVVVV VVGGTFAYSK
FIKGPNETKA QNMVFHAQQY FERDSFRLAL NGDGNYEGFL QVIDKYGSTK TGQLAKYYAG
VSYVKLGEFQ KGADLLTAFN GGDQVVQAMA YGLAGDAYME LNQTDKGIEY YKKAGHHSDN
ELTAPTYLFR AGLALEKANK TADAVAIYKE IQSKYPQTAE GREIEKYLAR LGEVRSN
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