| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5416 |
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| Symbol | |
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| ID | 8361593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6926013 |
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| End bp | 6927710 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967562 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003125046 |
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| Protein GI | 256424393 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.133389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGA ATACGAAAGC TCAGGAGCAG AATACCTACG ATGCGATTGT GGTAGGCTCC
GGTGTTAGCG GTGGATGGGC TGCAAAAGAA CTCACCGAAA AAGGTCTTAA AGTTTTAATG
CTGGATAGGG GAAAGAAACT TGAACACGTT AAGGATTACG AAACTGCAAC AAAAGATCCC
TGGGAATTTA AACATCGTGG CCGTATAACA GTTGATCAGC GTGAAACGCA TCCGAAACTA
AGCCGCGATT ATCCGTATAG TGAACATAAC GAAAAATACT GGATCAACGA CTCTCAGAGT
CCATATAATG AAGTAAAGCG TTTTGACTGG TATCGTCCTG ATATCGTGGG TGGTAAATCC
ATCATGTGGG GCCGTCAGTC TTATCGCTGG AGCGACCTTG ATTTTGAAGC GAACCTGAAA
GATGGTATTG CTGTTGACTG GCCGATCCGT TACAAAGACC TGGCTCCCTG GTATGACTAT
GTAGAGAAAT TTGCAGGTAT CAGTGGTCAG GCAGAAGGAT TACCACAATT GCCGGATGGT
CAGTTCATGC CTGCTATGGA CATGAACTGT GTGGAGAAAG ACCTGAAATC CAAAGTGGAA
AAAGCGTTCC CTGATCGCAG AATCACCATG GGACGTGTCG CTAATATCAC CAAGCCATTA
CCTGGCCGTA CACAGTGTCA GTTCCGTAAT CTGTGTAGCC GTGGTTGTCC GTTTGGCGCT
TATTTCAGTA CGCAGTCATC CACGCTGCCG GCTGCAATGG CGACAGGCAA TCTGACGCTC
AGACCGGACA GCATCGTTAA CTCCGTGATT TATGACGAAA AACTGGGTAA AGCGACCGGT
GTAAAGGTGA TTGACAAGCA TACCAAGCAG ATGACCGAAT ACTACGCGAA AGTGATCTTT
GTAAATGGTT CTACGTTAGG TACCACCTTC GTACTGATGA ACTCTATTTC CAACCGTTTC
CAGAATGGTC TGGGTAATGA TAGTGGCGTA TTGGGTAAAT ACCTGATGGA CCACCACTTC
CGTACAGGTG CTTCTGGTCG TGCAGAAGGA TTTGATGATA AATACTTCTT TGGTCGCCGT
GCAAACGGTA TCTATATCCC TCGTTACAGA AATATCGGTA GCGATAAACG TGATTATCTC
CGTGGTTTCG GTTACCAGGG GGGCGCAAGC CGTGGCAGCT GGGCACGCGG TATCGCTGAA
ATGGGTGTTG GTAAAGACTT TAAAGATATG CTGTCAGAAC CAGGTAGCTG GAGCATGGGG
CTGGGTGGTT TCGGTGAATG TCTGCCTTAT GAAGATAATA AGGTGACGCT GGACAACTCT
GTGAAAGATG ACTGGGGACA GCCCGTCCTG AAGTTCGACG CTGAATTTAA AGAGAATGAA
ATGAAGATGC GTAAGGATAT GATGAACGAT GCGGCAGAAA TGCTGGAAGC ATCCGGATTC
AAAGATATCA AGACGTACGA CAATGGTTCA TATCCTGGTA TGGCGATTCA TGAAATGGGT
ACCGCACGTA TGGGACGTGA TCCTAAGACT TCCATCCTCA ACAGCTGGAA CCAGATGCAC
GCTGTGAAGA ATGTATTTGT GACTGATGGT GCGTCTATGA CTTCCGCAGC TTGTGTTAAC
CCGTCACTGA CTTACATGGC GATGACGGCA AGGGCGGTAG ATTATGCGGT GAAGGAAATG
AAGAAAGGAA ATATTTAA
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| Protein sequence | MNLNTKAQEQ NTYDAIVVGS GVSGGWAAKE LTEKGLKVLM LDRGKKLEHV KDYETATKDP
WEFKHRGRIT VDQRETHPKL SRDYPYSEHN EKYWINDSQS PYNEVKRFDW YRPDIVGGKS
IMWGRQSYRW SDLDFEANLK DGIAVDWPIR YKDLAPWYDY VEKFAGISGQ AEGLPQLPDG
QFMPAMDMNC VEKDLKSKVE KAFPDRRITM GRVANITKPL PGRTQCQFRN LCSRGCPFGA
YFSTQSSTLP AAMATGNLTL RPDSIVNSVI YDEKLGKATG VKVIDKHTKQ MTEYYAKVIF
VNGSTLGTTF VLMNSISNRF QNGLGNDSGV LGKYLMDHHF RTGASGRAEG FDDKYFFGRR
ANGIYIPRYR NIGSDKRDYL RGFGYQGGAS RGSWARGIAE MGVGKDFKDM LSEPGSWSMG
LGGFGECLPY EDNKVTLDNS VKDDWGQPVL KFDAEFKENE MKMRKDMMND AAEMLEASGF
KDIKTYDNGS YPGMAIHEMG TARMGRDPKT SILNSWNQMH AVKNVFVTDG ASMTSAACVN
PSLTYMAMTA RAVDYAVKEM KKGNI
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