Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5333 |
Symbol | |
ID | 8361510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6813218 |
End bp | 6813682 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644967481 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003124965 |
Protein GI | 256424312 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.828951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCATGA AAGAAAAAAA TAAATCAACG GATAAGGACG ATAACCTGTT TGCTACATTA TATATACTAA AGCGGGCAAT GGACGACTGG GGTAGCCGCA ACATTGCTAA CTGGGGTTAT GAAAATTTCA ATATTACTTA TATGCCGTTC TTTATGAATA TCGGCAATGA GGGTGTTTCC AATAATGAGA TCGCAGAAAA GATGCGGGTG ACCAAACAGG CTGCCAGCAG GATTGTACGT GAGCTGGAAG CGTCTGGTCT GGTGAGGGGT GAGAAGAGTG ATAGTGACGG TCGTTCGGTA AAACTATACC TGACGGAAGA AGGGCATAAA TTCCAGGAGA TCGCGAAGAA TGAAGCCAAA ATTTTGAGAA AGGAATATGT GAAAGTCATC GGTCGCGAGC GGTATGAAAC AGCCGTGGAT GTATTGAAAG AACTGATTGC GTTTCATGAA AATTTATTGA AATAG
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Protein sequence | MAMKEKNKST DKDDNLFATL YILKRAMDDW GSRNIANWGY ENFNITYMPF FMNIGNEGVS NNEIAEKMRV TKQAASRIVR ELEASGLVRG EKSDSDGRSV KLYLTEEGHK FQEIAKNEAK ILRKEYVKVI GRERYETAVD VLKELIAFHE NLLK
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