Gene Cpin_5333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5333 
Symbol 
ID8361510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6813218 
End bp6813682 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content42% 
IMG OID644967481 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003124965 
Protein GI256424312 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.828951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATGA AAGAAAAAAA TAAATCAACG GATAAGGACG ATAACCTGTT TGCTACATTA 
TATATACTAA AGCGGGCAAT GGACGACTGG GGTAGCCGCA ACATTGCTAA CTGGGGTTAT
GAAAATTTCA ATATTACTTA TATGCCGTTC TTTATGAATA TCGGCAATGA GGGTGTTTCC
AATAATGAGA TCGCAGAAAA GATGCGGGTG ACCAAACAGG CTGCCAGCAG GATTGTACGT
GAGCTGGAAG CGTCTGGTCT GGTGAGGGGT GAGAAGAGTG ATAGTGACGG TCGTTCGGTA
AAACTATACC TGACGGAAGA AGGGCATAAA TTCCAGGAGA TCGCGAAGAA TGAAGCCAAA
ATTTTGAGAA AGGAATATGT GAAAGTCATC GGTCGCGAGC GGTATGAAAC AGCCGTGGAT
GTATTGAAAG AACTGATTGC GTTTCATGAA AATTTATTGA AATAG
 
Protein sequence
MAMKEKNKST DKDDNLFATL YILKRAMDDW GSRNIANWGY ENFNITYMPF FMNIGNEGVS 
NNEIAEKMRV TKQAASRIVR ELEASGLVRG EKSDSDGRSV KLYLTEEGHK FQEIAKNEAK
ILRKEYVKVI GRERYETAVD VLKELIAFHE NLLK