| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5326 |
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| Symbol | |
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| ID | 8361503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6801520 |
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| End bp | 6803364 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967474 |
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| Product | Lanthionine synthetase C family protein |
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| Protein accession | YP_003124958 |
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| Protein GI | 256424305 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4403] Lantibiotic modifying enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.106396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATGC CGGCGGTAAA TCTGAAAGAT GAACAAGTGA TAGCGGCTGC TTTGCTGGAC
CTGGCCGAAA AGCTTTTACC CGCTATCCAG CCGGACACGA TTGCTGCTGA CCTGCATAAT
GGCGCACCTG TAGACCTTTT CAATGGAAAG GCCGGTATCA TTGTGTTTTA CCTGCGTCTG
GCTGAATATG ATCCGGGGTA TCTGCCTGTG TGTACCGCCG CCGCAGATGT ATTACTATAT
CATCCCGCTA TTTCTGAGCA GGCGTTTTTT ACCTTATATA CCGGCGCGAC CAGTCTGGTG
TATTTGTGTA TACAGTTGTA TGAGGCCACC GGAGATCAGC GATACCTGGA ACGAGGGCTT
GCACTGGTAG CGCATTACCA GGAAGGCATC TTGCAGAAAG TAGTACAGGA TGATTTCATC
AGTGGACATG CAGGTAACTT ACTGGTGTTG ACGCAACTAC ATGCCTATAC AAAGGATGAC
TCATTGCGTG TGTTGATCCG GCAACTGGCA GACAAATTAG TGGCACATGC ACGGATTGCT
GCGCAGGGAT TACGCTGGGG GCATCTGAAG CGGTCGTATG ATTGTCTGAC AGGACTGTCT
CATGGCGCAG CAGGCATAGC CCATGCTTTA TTACAGGTAG CAGTTTATTT TGAAGACGAA
GGCTTACGTT ACCTGGCGAT GCAGTCCTGG GCGTATGAGA TGAAATATTA TGATCCGGTA
TTTAAAAATT GGCTGGACCT GCGGCTCACA AGTACCCATT TACAGGAAAC GGATATTATG
GGCTGGCAGA TTGCTGATTT TCGCCGGTAT ATCAGTGATG TGAATGCATG GGCACATGGG
GCCGCCGGTA TCGGATTAAG TCGGATGTAT GCCTGGGGAA TAAGCGGAGA AGCCCATTTT
GCTGCTGAAA GCGAATGGGC ATTGACACGT TGTCTGCAGG ATGCGGATAC CCTGATGCGG
GGAGATTTTA CCTTGTGTAG TGGTTACGGC GGGATAGGGA TGTTCTTAAT GGAAGCAGGG
GCTGTATTCG ATAGGCCGGT TTTACGACAA ACAGCACAGC GGATCGCAAT GGCCGCCATA
CGTTATTTTG AGGCACATGG CACTTATAAC AGTTACATTA AAGACGCACA AGATGACCCG
GGATTATTTT CAGGACTGGC GGGTGTAGGA TATCTGTTGG TCAGTGTATT ACTGCCATAC
AAAGAAAATA CGGTGATGGC GCCATTGATC AGCAGGAACA GGAAAGATGT GCCTTTGTAT
GAGAAAGGGG AGGTAAAGCG GGCGCTGTTT AGCCGTTATT ATGAGAAGTC CCTGCAGCAA
TATCCTGCCG CGCTGATCGC TAATGACATG CATGAACTGG AGCAGCTGTT AGAGAAGGAG
ATGGGGGACC AGGATTGTTT CAGGTATGAG AAAAGTCTGG CAGATGTATG GCGATCGCAT
AGCGGATGGC TGTGTTACCA GCAACGCAAT CGGTTACTGG AAAAGCGGAA TAGTTATTTG
TTGCAGGAGA ATGATAGGGT GTTGTTGCAG ACTGTTTTTG TGCCGGTTCC GGAGTTAATG
GTATGTGCTA CTGATCACGC CTGGCATGGG GAGGCAGTCA CCAATCAACA AGAAAGTACA
GGATATTACT ATGTACATAT TGCACATGTG CAGGGAGTAA GTACCTTTCC TGTTAATCAG
TTTACAGCAA TGTTATTAAA GGCATTCGAG GGGCAGTTAC CATTACTGCA ATTGATCACT
GATATTATTT ATCCTCAGGT AGATGTTGGG ATGGCTGCTT TGCAGGAAGC GGTACTGTCA
CAGGTGCGGG TGTTCTTACG GCAATGTATG ATTACCCAAA AATAG
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| Protein sequence | MSMPAVNLKD EQVIAAALLD LAEKLLPAIQ PDTIAADLHN GAPVDLFNGK AGIIVFYLRL
AEYDPGYLPV CTAAADVLLY HPAISEQAFF TLYTGATSLV YLCIQLYEAT GDQRYLERGL
ALVAHYQEGI LQKVVQDDFI SGHAGNLLVL TQLHAYTKDD SLRVLIRQLA DKLVAHARIA
AQGLRWGHLK RSYDCLTGLS HGAAGIAHAL LQVAVYFEDE GLRYLAMQSW AYEMKYYDPV
FKNWLDLRLT STHLQETDIM GWQIADFRRY ISDVNAWAHG AAGIGLSRMY AWGISGEAHF
AAESEWALTR CLQDADTLMR GDFTLCSGYG GIGMFLMEAG AVFDRPVLRQ TAQRIAMAAI
RYFEAHGTYN SYIKDAQDDP GLFSGLAGVG YLLVSVLLPY KENTVMAPLI SRNRKDVPLY
EKGEVKRALF SRYYEKSLQQ YPAALIANDM HELEQLLEKE MGDQDCFRYE KSLADVWRSH
SGWLCYQQRN RLLEKRNSYL LQENDRVLLQ TVFVPVPELM VCATDHAWHG EAVTNQQEST
GYYYVHIAHV QGVSTFPVNQ FTAMLLKAFE GQLPLLQLIT DIIYPQVDVG MAALQEAVLS
QVRVFLRQCM ITQK
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