Gene Cpin_5244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5244 
Symbol 
ID8361421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6634975 
End bp6635502 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content49% 
IMG OID644967392 
Producthypothetical protein 
Protein accessionYP_003124876 
Protein GI256424223 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000191659 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000566819 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGTCCC TGCTGGCCAA TGCATCAGCA GAACAGGTAA GCACGGTAGT GATTCCGATT 
GTTTGCAGCT CGGAGAATGC CATCCTGCCG ATCTGTGATG ACGTGTGTCT CTGTTGTGAG
GAAGAAGTGG AGATTGACAC CGAAAATGCG ATCTATTGTG ACCGTACTTT CCTGGCAGAT
CCTTATTCAT TCTGGGCAAC GGTGGTATTA CCGGCATGGC CGCAGCGTTT CCGTCTGGCG
CGTTTCAGAC AGTTCTTTGA AGATACCTTA CGCAGAGAAG CGCCGGCGCA TATCCGGTTG
AATATACTCT GGGTGAGCCC ACAACAGATG CTGGAATTCG AAGGCGCCTG GAAGAACTGG
CTGGCAGCAT TGTCGAGAGG AGAAAGTTGT GATTATGATG ATAGTCTGCA AGCGCTGAAT
CTTGTATTAA AAGAACTTAA AAATGTATAT CCGGCCGCTT ACATGTGGGA TGACGAAGGA
GGGGATGACA AGCCACTGAT CTTATTGGAT GAGGCTATGC TGGCATAG
 
Protein sequence
MQSLLANASA EQVSTVVIPI VCSSENAILP ICDDVCLCCE EEVEIDTENA IYCDRTFLAD 
PYSFWATVVL PAWPQRFRLA RFRQFFEDTL RREAPAHIRL NILWVSPQQM LEFEGAWKNW
LAALSRGESC DYDDSLQALN LVLKELKNVY PAAYMWDDEG GDDKPLILLD EAMLA