| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5156 |
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| Symbol | |
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| ID | 8361333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6436460 |
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| End bp | 6437032 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967305 |
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| Product | Cupin 2 conserved barrel domain protein |
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| Protein accession | YP_003124789 |
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| Protein GI | 256424136 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4297] Uncharacterized protein containing double-stranded beta helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0494283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000239774 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGATAGGA AAAAATTCAT AGGTATTGTT GGTGTAGCTG TAACAATGCC CATCTCAACA
CTTTTTGCAA CGATCAATAT GGAAGCACAG CAATTTTACT TTAAGGATGA CGGGAAGATC
CCTAACAGCA AATACCCTTT ATTACTTTAT CGCAATGCGT TTAAACAAAG AGGGAGTGAG
GGCGCTGCCT GGCTGGAGGA ACAATTTGCA AAGGAAAACT GGACAAATTC CTGGCGGAAT
GGCGTGTATC CTTTTCACCA TTATCACAGT ACGTCGCACG AAGTATTAGG TGTTTATTCC
GGGGAAGCTT TATTGCATTT AGGCGGAGAA GGTGGTGAAA AGGTAAAAGT GCAGGCAGGG
GATATTATCG TCATTCCGGC TGGGGTAGGG CATAAAAATC TGGGTAGTGA AAACCTGGGA
ATAGTGGGTG CTTATCCTGA GGGCAGGAAC TGGGACCTGA ATCGTGGAGA ACCAGGGGAG
CGGCCGAAGG CAGACCGGAA TATTGCCTCA TTGCCGGTAC CGGCGACTGA TCCGCTCAAT
GGGAAAGGGG GACTGCCGCA GATCTGGAAA TAA
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| Protein sequence | MDRKKFIGIV GVAVTMPIST LFATINMEAQ QFYFKDDGKI PNSKYPLLLY RNAFKQRGSE
GAAWLEEQFA KENWTNSWRN GVYPFHHYHS TSHEVLGVYS GEALLHLGGE GGEKVKVQAG
DIIVIPAGVG HKNLGSENLG IVGAYPEGRN WDLNRGEPGE RPKADRNIAS LPVPATDPLN
GKGGLPQIWK
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