| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5139 |
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| Symbol | |
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| ID | 8361316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6414520 |
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| End bp | 6414948 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644967288 |
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| Product | Ethyl tert-butyl ether degradation EthD |
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| Protein accession | YP_003124772 |
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| Protein GI | 256424119 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02118] conserved hypothetical protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.249739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00632638 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAAGTGTC AACTAATTTT GTCGTTATTG CTTTTAACCA CTTGTTTTGT TGGATTTGGT
CAGGAAAAGG GCGCGGGAAA ATCAAAGAAA CAAAATGCTG ATGTAGTTGA AAAGGGCTTA
ACTAAGATAT CCATCTTGTA CCCTTATGCC GAGGGTAAAA CCTTCGATAT GGTGTATTAT
GAAGCCAAAC ACATGCCCAT GGTAGCCAGT TATTTAGGCT CAAATCTGGT GAAATATACC
ATTGAAAAGG GACTTTCCGG TGGTGCACCT GATCAGCCTT TACTTTATAT GGCTGTTGGC
GCATTTTATG TAAAGAGTTT AAGTGAATAT CAGGCGGCTA TCAAACCAAA TTTAGATGCA
ATTCGGGCGG ATTTCGCAAA CTATACCAAT GTGCTTCCTG TCGTTTTGGT GAGTGAAGTC
GTAAAATAA
|
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| Protein sequence | MKCQLILSLL LLTTCFVGFG QEKGAGKSKK QNADVVEKGL TKISILYPYA EGKTFDMVYY
EAKHMPMVAS YLGSNLVKYT IEKGLSGGAP DQPLLYMAVG AFYVKSLSEY QAAIKPNLDA
IRADFANYTN VLPVVLVSEV VK
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