| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5126 |
|---|
| Symbol | |
|---|
| ID | 8361303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 6399726 |
|---|
| End bp | 6400682 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644967275 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003124759 |
|---|
| Protein GI | 256424106 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.640832 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATATTTA AAGACTTTGA CCTTTCTAAT TTCTGGGAAG ATAGCGAATA TGCGTTGCAG
GAATATGTTG GCCAGGCACC TTCCGACGAG CTTATTGCGA ATATCGAAGA AGAACTGGGT
TTTAAACTAC CTGCTTCATA TATTGAATTA ATGAAGTTGC ATAATGGCGG AATCCCTAAA
AACACCTGTT TCCCGACCAG CGAAAACACT TCCTGGGCGG ATGACCATAT TGCTATTACA
GCAATACTGA GCATAGGGCG GGAAAAACCA TATTCCTTAT GCGGGGAATT GGGCAGTCAG
TTTATGATTG ATGATTGGGG ATATCCCGAC ACTGGCGTCT ATATTTGTGA CTGTCCATCT
GCGGGACACG ATATGGTAAT GCTGGACTAC TCAAAATGCG GAAAAGACGG GGAGCCCGAA
GTGGTGCATG TTGACCAGGA ATCGGATTAT AAAAAAACCT TTTTGGCTAA AGACTTCGAG
ACTTTCATCA GAGGGCTTGT AAGTGAAGAT ATATACGATA CTTCTGCACA AGACCTGATT
GACACACTGG AATCTTTTAA AACAGGCCGA TTCTCAGATA CACTACAGCA ATACTTTAAG
AAAGAGACGG CAATTAACTT CGATTCTGTT TTAAGGAATC TTTTCACTGA GCTGAGTAAA
GAAAAAGGGT ACTTCGCTTT GCACGGTGAT CCACTTTCTT ATCTGGCCTA CGATGTTCAA
TTTTACCTGT TAACGCTAAA TAAGGAAATT AAGTCAAAAG CAGCTTTTGT AAAAGCATAC
CTGCCAATGG TAGCAATGGG AAACAACGAA ATCTCAACAG GTGGGTATGC GGATTTTTTC
AAGGATTGGT TTGATGAAAG AGTTGGTAAT AAGCAAATAG TACAGACAGC GGGTAATTTT
GAGTTTAGCG AGGACTACAA AAACCAGTTC TTTGAGCAGG TTAGGAAATA TGAATAA
|
|---|
| Protein sequence | MIFKDFDLSN FWEDSEYALQ EYVGQAPSDE LIANIEEELG FKLPASYIEL MKLHNGGIPK
NTCFPTSENT SWADDHIAIT AILSIGREKP YSLCGELGSQ FMIDDWGYPD TGVYICDCPS
AGHDMVMLDY SKCGKDGEPE VVHVDQESDY KKTFLAKDFE TFIRGLVSED IYDTSAQDLI
DTLESFKTGR FSDTLQQYFK KETAINFDSV LRNLFTELSK EKGYFALHGD PLSYLAYDVQ
FYLLTLNKEI KSKAAFVKAY LPMVAMGNNE ISTGGYADFF KDWFDERVGN KQIVQTAGNF
EFSEDYKNQF FEQVRKYE
|
|---|
| |