Gene Cpin_5105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5105 
Symbol 
ID8361281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6365937 
End bp6366203 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content42% 
IMG OID644967253 
Producthypothetical protein 
Protein accessionYP_003124738 
Protein GI256424085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.144246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.372875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTT CAGTTTTCGA CACGTATGTC CAGAAGAAAA ACGGTGCTGT TATGCACTTT 
GACATATTAG TTCCTTCTGA TCTTAAAGAC CTGGAAAAGA TACATACCTA CGGACGTCAG
TATCTGGCAC AGAAAGGACA GGAAGGACAA ACGCTCAGTA CCAATGAATG CCGTTTCTGC
CATATCGAAC AGGCAGATGA CAATGTGGTA GCCGATATTG ACCGCCAGGG ATATTCCATT
ATAGAAATGC AGGAATGTAA TAACTAA
 
Protein sequence
MKVSVFDTYV QKKNGAVMHF DILVPSDLKD LEKIHTYGRQ YLAQKGQEGQ TLSTNECRFC 
HIEQADDNVV ADIDRQGYSI IEMQECNN