| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5084 |
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| Symbol | |
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| ID | 8361260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6329036 |
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| End bp | 6329914 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967232 |
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| Product | secreted repeat of unknown function |
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| Protein accession | YP_003124717 |
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| Protein GI | 256424064 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4315] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.182852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.686692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTTAT TCAAGAAATC AATGGTGGCA ATGCTTTTAA TTGCCACAGT GGCCACCTCA
TGCTCCGATG ATGACAACGA CGGAGTTACG CCAACGCCAC CACAAGTTCC GCAGAAAACC
GTGAAAGTCG CCAATAACAC AACTTTCGGC GCTATTATGA CTGACAGCAC AGGCAAAACT
TTATACTTCT TTTCTAATGA TGCACAGGGC ACTCCTACCT GTAAAGATGG CTGTGCTGCT
GTATGGCCTA CCTTCTACGT AGAAGAATCT GCACTCACCG TTGATAGTTC CCTGAACAAG
GCTGATTTCA CGACTGTAAC CCGTCCTGAC GGTACTAAAC AAACCGCATA CAAAGGATGG
CCTTTATACT ACTATGCGCA GGATGCTGCA GCAGAAGAAG TGAAAGGTGA TAACGTAGGT
GCTATCTGGT TTGTAGCAAA ACCTGATTAC TCTGTAATGG TGGCTAATTT CCAGTTGCAC
GGCAACGATG GTAAAGATTA TGTACTGAAC AACACAGGCG CGATTGCAGC AGGTACTGGT
GCATCCAAAT ACCTGGTGGA TGATCATGGT CTGACACTGT ACAAATTTGC CAACGACAAA
GCTGGTACTA ACAACTTCAC CAACAACGAT GATACGCACA ATGCTATCTG GCCTATCTAC
GAAGTATCAG AAGTGAAAAA TGTACCTACC GGTTTTACCA AAACAGATTT TGCGATCATT
ACCGTATTGG GTAAAAAACA GATCACTTAT AAAGGATGGC CTATGTACTA CTTTGGCCAG
GACGCTAAAG TAAGAGGCGC CAACAAAGGT GTGAGTGTTC CTACTCCAAA TGTATGGCCT
GTTCTTTACA CAACTACAGC TGCCGCTCCT CAACCGTAA
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| Protein sequence | MHLFKKSMVA MLLIATVATS CSDDDNDGVT PTPPQVPQKT VKVANNTTFG AIMTDSTGKT
LYFFSNDAQG TPTCKDGCAA VWPTFYVEES ALTVDSSLNK ADFTTVTRPD GTKQTAYKGW
PLYYYAQDAA AEEVKGDNVG AIWFVAKPDY SVMVANFQLH GNDGKDYVLN NTGAIAAGTG
ASKYLVDDHG LTLYKFANDK AGTNNFTNND DTHNAIWPIY EVSEVKNVPT GFTKTDFAII
TVLGKKQITY KGWPMYYFGQ DAKVRGANKG VSVPTPNVWP VLYTTTAAAP QP
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