| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5055 |
|---|
| Symbol | |
|---|
| ID | 8361231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 6300960 |
|---|
| End bp | 6301334 |
|---|
| Gene Length | 375 bp |
|---|
| Protein Length | 124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644967203 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_003124688 |
|---|
| Protein GI | 256424035 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000148317 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0527856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCTA TCTTATTAAT TGATGATGAT GCAGATGAAA TTAGTATCCT GAATGAAGCC
GTGGAAATGA GTGGTACCGA TAGCGTATGC GATTGGGCAC AAGGTTTCGA AGTCGCTTAC
AGTTTATTAA AAGGAAATCA ACCTGACCTG ATCCTGCTGG ATTATAACAT GCCGGGGCGG
GATGGTTTAT TTTGTCTTGA GGAAATAAAA CGGAACCAGG ACTTTCGTCA TATTCCGATC
GTGATGTACT CCACTTATAT TGATTACGGT TTGCGACAGG AAGCCATGAA GAAAGGTGCG
TTTCGTTGTA TACAAAAGAC TACTTCTGTG CATGATCTTG TAAGGGAATT ACAGAACTTA
TTAATACAGG TCTGA
|
|---|
| Protein sequence | MKSILLIDDD ADEISILNEA VEMSGTDSVC DWAQGFEVAY SLLKGNQPDL ILLDYNMPGR
DGLFCLEEIK RNQDFRHIPI VMYSTYIDYG LRQEAMKKGA FRCIQKTTSV HDLVRELQNL
LIQV
|
|---|
| |