| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5042 |
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| Symbol | |
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| ID | 8361218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6288393 |
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| End bp | 6289511 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967191 |
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| Product | glycosyl transferase family 9 |
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| Protein accession | YP_003124676 |
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| Protein GI | 256424023 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.502044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0534111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATG AATGGCATTC CTGCCGCCGT ATATTGTGTA TACGGCCGGA TAACATAGGA
GACCTGTTAA TGACTACACC GGCAATCAAA GCCCTGAAAG AAACGTTCCA TTGTCATATT
ACCGTACTCG TGTCTACCCT TGGGGCGGCG GTCGTTCCCG AAATTCCCGA AATAGACGAT
GCCATTATTT GTGATGTGCC CTGGGTACAG ACAAATAATA TCCCGCTTCC TTCACAGTTT
CATGAACTGG TACAACGGTT GAAAGAACGT CACTTTGACG CAGCAGTTAT TTTCACCGTA
TACAGTCAGA ATCCCATGCC ATCGATTCTG TTGGCTTACC TGGCGGAGAT CCCGCTCCGG
CTGGCTTATT GCAGAGAGAA CCCATATCAT TTACTGACGC ACTGGATACC GGATGAAGAG
CCATATAGTT TTATCCGGCA CCAGGTCTTA CGTGATCTTG AACTGGTTGC GCGGGTGGGA
TGTATTATAA AAGACCGGCA GCTCAGTATA CGTGTACAGG AGCGATTGTG GCCACTGGTC
TGGAACAAAT TGCAGTCACT CGGTATCGAT CCGGAACAAC CCTGGATCAT ACTGCATCCG
GAAGTATCTG AACAGAAAAG GAAATATGCG GTATCGGACT GGATTGCAGC AGGAAGAAAG
ATCCTGACGC AAAGGGATTG TCAGTTGCTG ATCACAGGTA AAAACAATGA GACGGAAGCT
ACAGCTATTG CAACAGGTAT AGGAGAGAAG TGTTTTGCAG CAGCAGGCGT ATTTGATTTA
CAGGAGTTGA TCGTACTCAT TGCACATGCT TCTTTGCTGG TATCTGTTAA CACCGGTACA
GTGCATATAG CTGCGGCTGT TCAGACGCCT GTATTGGTAT TGTATGCGTT GACCAACCCG
CAACATACGC CCTGGTGTGT ACCTAACGAT GTATTATATT TTGATGTACC TAAAGACCTG
CAAAGTAAGA ACGAGATAGT GAAATATGTT TATCGGTCTT TCTCACGGGA AGAGTTGCCG
CTTGCCACAT CCACGCGTAT TGCTGAAACA GTATCAGCGC TGCTGGCTAT GCGCGGTGCC
TCTTCAGGTA GTCTCGAGAA GCCTCATACC CTGCCTTAG
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| Protein sequence | MKNEWHSCRR ILCIRPDNIG DLLMTTPAIK ALKETFHCHI TVLVSTLGAA VVPEIPEIDD
AIICDVPWVQ TNNIPLPSQF HELVQRLKER HFDAAVIFTV YSQNPMPSIL LAYLAEIPLR
LAYCRENPYH LLTHWIPDEE PYSFIRHQVL RDLELVARVG CIIKDRQLSI RVQERLWPLV
WNKLQSLGID PEQPWIILHP EVSEQKRKYA VSDWIAAGRK ILTQRDCQLL ITGKNNETEA
TAIATGIGEK CFAAAGVFDL QELIVLIAHA SLLVSVNTGT VHIAAAVQTP VLVLYALTNP
QHTPWCVPND VLYFDVPKDL QSKNEIVKYV YRSFSREELP LATSTRIAET VSALLAMRGA
SSGSLEKPHT LP
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