Gene Cpin_5031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5031 
Symbol 
ID8361207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6277934 
End bp6278380 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content43% 
IMG OID644967180 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 
Protein accessionYP_003124665 
Protein GI256424012 
COG category[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.774177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.226075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTAC AAGCAATCCT GGACAAGCTC CCTTTTACAG CTCCTTTTCT TTTTGTCGAT 
GGACTGGACC ATATTGACAG CGATAAAGTA AAGGGACATT TTACTTTCCG GGAAGACCTG
GATTTTTATA AAGGACATTT TAAAGGTTAT CCTGTAACGC CAGGTGTTAT TCTTACGGAA
GTGACGGCAC AGATCGGACT GGTCTGTCTG GGTATTTACC TGATGGGAGA AGAGGAGTTG
GGAGATAATA TGAGCTTCGG ACTCACCTCC ACCGAAATAG AATTTATGCG TCCTGTTTTT
CCGGGAGAAA AAGTAACGGT GGAAGCAGAT AAAGTATACT TCCGTTTCGG TAAACTGAAG
TGCCGGGTGA CCATGAAAAA CGAAACACAG GAGGACATAT GCAGTGGCGT TATTGCCGGA
ATGATCATTA CCAAACCACA TGAATAA
 
Protein sequence
MTVQAILDKL PFTAPFLFVD GLDHIDSDKV KGHFTFREDL DFYKGHFKGY PVTPGVILTE 
VTAQIGLVCL GIYLMGEEEL GDNMSFGLTS TEIEFMRPVF PGEKVTVEAD KVYFRFGKLK
CRVTMKNETQ EDICSGVIAG MIITKPHE