| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5021 |
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| Symbol | |
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| ID | 8361197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6271955 |
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| End bp | 6272626 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967170 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_003124655 |
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| Protein GI | 256424002 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.886555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.11436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAGC CCGGATGTAT CATATTTGAC TGTGACGGCG TATTGGTAGA TAGTGAAGTG
ATTGGCGTAA GAGTACTTTT AGATATGGCA TCCGAATATG GCGTGACCAT GGACCTGCAG
GAAGCTGTAG AAGAATTCAG CGGCATCCGG CTGAAAGAAG GGATCAAAAT GTTACAGCAA
AAAGCGCACA GCCCCTTTCC TGAGGACTTT GAGCAGGCCT TCCGTAAACG TTCGTATGAA
GTCTTTAAGA CGGAAATGCG CCCTGTAAAT GGTATTAAAA CCATACTTGA TAGCCTTACC
ATGCCTTTCT GCGTTGCCTC CAGCGGCCCC CTAGAAAAGA TGAAACTGAA TCTTACAATT
ACCGGCCTGC TACCCTATTT TGAAGAAGGT GACAGGATCT TCAGCGGTTA TCAGATCAAT
AGCTGGAAAC CGGATCCGGG TATCTTCCTG TATGCAGCAG AACAAATGGG CTTCTCTCCT
GCAGCATGTG TCGTGATCGA AGACAGTAAG GCAGGTGTGA TTGCAGCACA AAGAGGCGGA
TTCAAAGTAT ATGGTTATGC AAAACCATTC AACGGCGAAG AACTCAGAAA AGAAGGGGCC
ACCATTTTTT ATGATATGAA GGAATTATTA AACATCCTTC ACTTAAATAA TACGGCGGTA
CAACTCCCTT AA
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| Protein sequence | MQKPGCIIFD CDGVLVDSEV IGVRVLLDMA SEYGVTMDLQ EAVEEFSGIR LKEGIKMLQQ
KAHSPFPEDF EQAFRKRSYE VFKTEMRPVN GIKTILDSLT MPFCVASSGP LEKMKLNLTI
TGLLPYFEEG DRIFSGYQIN SWKPDPGIFL YAAEQMGFSP AACVVIEDSK AGVIAAQRGG
FKVYGYAKPF NGEELRKEGA TIFYDMKELL NILHLNNTAV QLP
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