| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5005 |
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| Symbol | |
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| ID | 8361181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6257316 |
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| End bp | 6258056 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967154 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003124639 |
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| Protein GI | 256423986 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.277781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0166501 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAG TAAATAATAC CGTATTAATC ACTGGCGGTG GCGCCGGTAT CGGTTTTGAA
ACAGCTAAAT TATTATCAGA AAGTGGTAAC CAGGTGATCA TCACTGGTAG AAATGCAGAT
ACACTTAACA AAGCAGTGGC TCAGCTGAAA AATGTGACAG CGATCGTTTC AGATGTATCA
AAAGAAGCAG ATGTACTGGC ACTGGTAGAT ACACTGAAAA AGGACTTCCC GGCACTGAAT
GTCGTAATCA ATAATGCAGC AGCGGCACAG GTATATAAAC TGGAAGCAGG TGCAGATGCA
TTCAGCAAAG CGGCACATGA AATGCACACC AACTACCTGT CTGTTCTCAG ACTGAATGAA
TTACTGTTGC CATTGTTATC TCAACAGGCG GAAGCAGCGA TCGTAAACGT TTCTTCTATC
GTAGCAATTA CACCGGGTCA CAGATTACCA GGATACGCCG CCAGCAAAGC TGCGCTCCAC
TCCTATACAC AGACACTCCG TTTCACACTG TCCGATACTA ATATCAAAGT ATTCGAACTG
ATGCCGCCAC TGGTAAATAC AGAGTTCTCC AAAGAGATCG GTGGTGAAAA TGGTATGCCG
GCAGCTGGTG TAGCCAGCGC TTTACTGGAT GCATTTGCTA CTGACAACTA CGAAATACAT
GTAGGCAATA CCGCCGACTT CTATAAACTC TTCCTTTCTT CTCCAGCTGA CGCATACGCC
GTACTGAATC AAAGGAACTA A
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| Protein sequence | MKTVNNTVLI TGGGAGIGFE TAKLLSESGN QVIITGRNAD TLNKAVAQLK NVTAIVSDVS
KEADVLALVD TLKKDFPALN VVINNAAAAQ VYKLEAGADA FSKAAHEMHT NYLSVLRLNE
LLLPLLSQQA EAAIVNVSSI VAITPGHRLP GYAASKAALH SYTQTLRFTL SDTNIKVFEL
MPPLVNTEFS KEIGGENGMP AAGVASALLD AFATDNYEIH VGNTADFYKL FLSSPADAYA
VLNQRN
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