| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4992 |
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| Symbol | |
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| ID | 8361168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6238644 |
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| End bp | 6241745 |
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| Gene Length | 3102 bp |
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| Protein Length | 1033 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644967141 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124626 |
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| Protein GI | 256423973 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00275317 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.224873 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAC TGACAATGCT GCTGTTGCTC ATTTGCGCCT TCCATGCGCA TATCTCACTC
GCAGCCATTC ACTCCTCCGG CCCTCCCATC ACCATCAGCG GGAAAATTAC AAGCAGCGAT
GGTACACCCA TCATCGGAGC TACCATACGT GTCAAAGGTT CATCCGCCGG CGCTACTACC
AATGCCAATG GCGTATTTAC ACTGACCTCC GTTGCAGATA ATGCGGTCCT TGTCATCTCC
AGCATGGGTT ACAACACCAT GGAATGCACA CTCAAACCAA CTGAAAAAGG CATTGCCGCG
ACGCCTGCAA AAGCAAGTGA TGCAGCGAAC ATCCGGCTGA CGGAAGGGCC GTCTCCTGTG
CTGAATATCA CCCTCACTGC ATCCGTACAG GAATTGGGGG AAAGTGTAGT CATTGCCTAT
GGTACTGTTA AAAAACGCGA CCTGACCGGC GCTGTTGTTT CAATCAAAGA AGCGGATATC
ACCGCTACGC CTGTTAACAA TGCCATGGAA GCATTACAGG GTAAAGTAGC CGGCATGGAT
ATCATGCGGG GATCAGGGGC CGTAGGTACC AACCCCAATA TCCTTCTGCG TGGCAGCCGC
TCCATTTATG GTGATAATAG TCCGCTGTTT ATCATAGACG GTATACAAAG CAGCTACGAT
CAGATCAACC CTTCTGACAT CGCCTCTATC GATATCTTAA AAGATGCCTC TTCTACCGCC
ATCTACGGAT CCGCCGGCTC CAATGGCGTA GTAATCATCA CCACGAAAAA AGGGAAGACG
GGCAAATCTT CGGTGAACCT GGATGTATTC TATGGCCTCT CCGGTAGTCC GCACTTCTTT
CACGGGATGA CAGGGGATGA ATACACCAAT TACCGTAAAG AATTATACCG TACCGCCAAC
GGAGAATATC CACAGGATAT GTCTCAGATC TTCACCACCG AACCGGTGTT GGATGCCTAC
AACAAAGGGA AGTGGATTGA CTGGGTAGGA TTGATTACCG ACAACACCGC CACGCAGCAG
AAATATCACC TTTCCCTCTC TGATGGCACC GGAAAAACAA AAGTCTACAC CTCCTTTACC
TATACAAAGG AAGAAGGTAT TCTCAGCAAT GAAAACCTCA ACCGCTATGC ATTACGTATG
AACCTGGACC GCGACATGGC CAGCTGGATG AAAGTCGGTA CCAATATCAA CCTCAACTAC
TCCATCCAGA ATGCCAGGGG CAAAAACATC TTTACCAAAT CATTATCGGC ATTGCCACTG
GGTGATGCCT ATGATGCCAA TGGTAATATC AACCCGGTAT TTGTACAGGG CGAAACCACA
CCGCTTGGCG ATCAGCTGCC TAATCAGTAT GCGGATAACA CACGCACCAC CTTCGCATAC
ATGAACGGCT ACCTGGATAT CAAGCCCTGG AAAGATCTCT CCTACCGTTC CGTATTAGGT
GTCACGCTCA ACAATTATCG CAATGGTAAA TACTGGGGCA GACAAGCCGT TTCTAACGTC
GTAACCGGCT ATGCAGCGCC GCTGGCTGCT ATCTATAACG GATTCACTTA CGGATATACC
TGGGAGAATA TCCTTACCTA CAATAAAACG ATCGCCACAG ATCATCAGCT CACCGTCACC
GGTGTCACCT CCTGGGCGAA GAACAGTGCT GATTACAACA ACTCACTAGG TCAGGGTCAG
GAGCTGGATT ACTACCAGTT TTACAACCTG GGCAATGGCA CACAGAAAAC AGGGAACGCC
TCCTCCTACG AACAACGTCA ACGTCTGTCC TTTGCCGGCA GGATCAACTA TAGCTTCAGA
GGCAAATACC TGCTGACGCT CACCAACAGA TGGGACGGCG TATCGCATCT CGCCAAAGGG
CATAAATGGA GCACCTTCCC CGCCGCTGTA GTCGCATGGC GTGTATCGGA CGAAAGCTTC
ATGCAGGGTG CAGGCAACTG GATGGATGAA CTAAAACTCC GTGCAGGCTA TGGCGTAACG
GGTAACTCCG GTGGTATGTC CGCCTATTCC TCTCAGACGC AGGCCGCTAC CTACCAGGCG
ATCTCCCTGG ATGGTAAACT CGTTCCTAAC GTCCAGAACT TTGGTACCTA CTCCAATCCC
CTTATCAGCT GGGAAAGAAG TTACAATACC AACATCGGAC TGGACCTCAC CATATTAAAA
GGCCGTATCA CCCTGAATGC AGATTATTAC AACACAGACA CCAAAGGGCT CTTATTCAAA
CGCTCCCTGC CGGTCACTTC CGGTCTTACT GCATGGGCCT CTCCTTTACA GACCTGGCAG
AACATCGGGC AAACCAACAA CAAAGGTGTA GAAATCACAC TCAGCACCCG TAACATTGTG
AGACCTGCTT TTGAATGGAG TACCAATTTC TCCTTCACCA GTAATAAAGA AAAGATCGTA
TACCTGCCGG ATGGCGACGT GATATCAGAA AAACTCTTCA TCGGACAACC CATCAGTGCC
CATTACGATT ACAAATACCA GGGTATCTGG GCCACCGCCG ATGAAGCTAC CGCCACGCTT
TACGGCGCTA AACCTGGTTT TGTGAAAGTA GCTACCAATG AGAAATTTGA TGCCAATGGC
ACAGGCGATA AAGGCGTACA CCCCTACTCT ATCAACGACC GGATGGTACT GGGTTCAACC
GTGCCTAAAT GGCTCCTGGG CGTCAATAAC AATGTCACTT TCCGCAACTT CGATCTCAAC
GTATTCACCA TGATGCGCTG GGGACAAATG ATCAGCAGTA GCCTGCTGGG CTGGTATTCT
ACAACGGATG ACGGTCAGCC GGCCGGCATC AGTTACTGGA CGCCCGAAAA TCAATCCGCA
CGCTATCCGC GTCCCGGTAT CAACAGCACT ACGGGTATAG AGTCACTTCG TTATGTAGAC
GGTTCTTTTA TCAAGATCAA AACAATTACA CTCGGCTACA CCTTCCCTGC CCATCTGACG
AAATACGCGC ATATCAGCAA GGGCAGGATC TATGCAAGCG CCTACAACCC GCTGATCTTT
ACCAGGAATC GCGATCTGAA AGGGACAGAT CCTGAAACAA ATGGTTCTGA TACCTTTCCG
CTCTTCGCGA CCTACGTATT TGGTATGAAC ATCACTTTTT AA
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| Protein sequence | MKTLTMLLLL ICAFHAHISL AAIHSSGPPI TISGKITSSD GTPIIGATIR VKGSSAGATT
NANGVFTLTS VADNAVLVIS SMGYNTMECT LKPTEKGIAA TPAKASDAAN IRLTEGPSPV
LNITLTASVQ ELGESVVIAY GTVKKRDLTG AVVSIKEADI TATPVNNAME ALQGKVAGMD
IMRGSGAVGT NPNILLRGSR SIYGDNSPLF IIDGIQSSYD QINPSDIASI DILKDASSTA
IYGSAGSNGV VIITTKKGKT GKSSVNLDVF YGLSGSPHFF HGMTGDEYTN YRKELYRTAN
GEYPQDMSQI FTTEPVLDAY NKGKWIDWVG LITDNTATQQ KYHLSLSDGT GKTKVYTSFT
YTKEEGILSN ENLNRYALRM NLDRDMASWM KVGTNINLNY SIQNARGKNI FTKSLSALPL
GDAYDANGNI NPVFVQGETT PLGDQLPNQY ADNTRTTFAY MNGYLDIKPW KDLSYRSVLG
VTLNNYRNGK YWGRQAVSNV VTGYAAPLAA IYNGFTYGYT WENILTYNKT IATDHQLTVT
GVTSWAKNSA DYNNSLGQGQ ELDYYQFYNL GNGTQKTGNA SSYEQRQRLS FAGRINYSFR
GKYLLTLTNR WDGVSHLAKG HKWSTFPAAV VAWRVSDESF MQGAGNWMDE LKLRAGYGVT
GNSGGMSAYS SQTQAATYQA ISLDGKLVPN VQNFGTYSNP LISWERSYNT NIGLDLTILK
GRITLNADYY NTDTKGLLFK RSLPVTSGLT AWASPLQTWQ NIGQTNNKGV EITLSTRNIV
RPAFEWSTNF SFTSNKEKIV YLPDGDVISE KLFIGQPISA HYDYKYQGIW ATADEATATL
YGAKPGFVKV ATNEKFDANG TGDKGVHPYS INDRMVLGST VPKWLLGVNN NVTFRNFDLN
VFTMMRWGQM ISSSLLGWYS TTDDGQPAGI SYWTPENQSA RYPRPGINST TGIESLRYVD
GSFIKIKTIT LGYTFPAHLT KYAHISKGRI YASAYNPLIF TRNRDLKGTD PETNGSDTFP
LFATYVFGMN ITF
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