| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4988 |
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| Symbol | |
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| ID | 8361164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6236644 |
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| End bp | 6237120 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967137 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003124622 |
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| Protein GI | 256423969 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.88444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.236889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATGAAA CGCAGTTTTT ACAGCTAATC GAACAACACC AACAGATCAT TCATAAGATC
TGCTGGCTCT ACCGGGATTC CCCGGAAGAC AGGGAAGATC TCTTTCAGGA GATTGTATGC
CAGTTATGGA AATCAGCTCC CTCATTTGAA GGCAGATCCC GGTTCAGTTC CTGGCTGTAC
CGCATTGCTA TCAATACCGC CCTGACTGCC TTCCGCAGGA AACAACCTGA TCTCAGATAC
CCCTCCGTCC TTCCTGATAT GCCGGCAGGC ATACCGGATG ACAATGAACA AATGGAACGC
CTCCGGATAG CAATCCGGCA GTTAAATGAT ACAGACAAAG CAATTATCAC GCTGTATCTC
GAAGAACTCA GCTACCAGGA AATAGCAGCT ATTACAGGCA TGACGGAGAA TAATGTCGGC
GTGAAGATCA ACAGGATAAA AAACAAATTG CATCAACTAT TACAGCAAAA AAAATGA
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| Protein sequence | MDETQFLQLI EQHQQIIHKI CWLYRDSPED REDLFQEIVC QLWKSAPSFE GRSRFSSWLY
RIAINTALTA FRRKQPDLRY PSVLPDMPAG IPDDNEQMER LRIAIRQLND TDKAIITLYL
EELSYQEIAA ITGMTENNVG VKINRIKNKL HQLLQQKK
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