| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4946 |
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| Symbol | |
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| ID | 8361122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6184904 |
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| End bp | 6185587 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967095 |
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| Product | hypothetical protein |
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| Protein accession | YP_003124580 |
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| Protein GI | 256423927 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0430991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.401264 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAAGC AATTATTGAG ATTTGGCCTC ATGGCTGGCC TGGGAGCATT CGTAATGACA
CAGACTAACG CAGTAAATGC GATGACTTCA AATGCAGACA CTGCAAACTT CGTACTCGAC
ACAGCGAACT TTGTAAGAGA CACTGCTAAC TTTGCTCCAG ACACCGCCAA TTTTGCAATG
GACACTGCCA ACTTCAAATT TGACACAGCC AACTTCAAAG TAGACACGGC TAACTTCAAA
ATGGATACGG CTAACTTCAA AGCAGACACC GCCAATTTCT CACCAGACAC AGCCAACTTC
AAAATGGACA CGGCTAACTT TAAGTACGAT ACAGCGAACT TCAGGTTAGA CACTGCAAAT
TTTGTAAGTG ACACGGCTGC CTTTGGCAAG GACACTGTCA GCTTTTCAAA AGACACTGCA
TTCTTCAAAG ACACTACCAA CTTTGCTTTT AAAGCAGATA CAGTAGCGTT CAGAAGTGCA
GACACGGTAG CGATTAAAGC AGACACTGCT ACTACCAGAG ACACACTCAG TTTCGCCGCG
AAACTGGATA CAGCAACAGC CGCAGCTGAT ACTGCCGCTG CTAAACGCGA CACAGCAGTC
ATGAGAAAAG ATACTGCTGC TGCAACACCG GCTGACACTT CCGCAGCGAA GAAGTCAAAG
GCCGTTAAAG TGAACAAAAA GTAA
|
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| Protein sequence | MKKQLLRFGL MAGLGAFVMT QTNAVNAMTS NADTANFVLD TANFVRDTAN FAPDTANFAM
DTANFKFDTA NFKVDTANFK MDTANFKADT ANFSPDTANF KMDTANFKYD TANFRLDTAN
FVSDTAAFGK DTVSFSKDTA FFKDTTNFAF KADTVAFRSA DTVAIKADTA TTRDTLSFAA
KLDTATAAAD TAAAKRDTAV MRKDTAAATP ADTSAAKKSK AVKVNKK
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