Gene Cpin_4857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4857 
Symbol 
ID8361033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6077161 
End bp6078570 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content49% 
IMG OID644967007 
ProductSialate O-acetylesterase 
Protein accessionYP_003124492 
Protein GI256423839 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000781027 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0560787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACA TGAATTGTTT CAACCTCACC TGCGCCCTCC TCCTGGCATT GCCCCTTGCA 
CTGAAAGCTA CCGTAAAACC ACACAGCCTC TTCACCGATC ATATGGTATT GCAGAAAGGT
GTTCCTGTAC CGGTATGGGG CGAAGCAGCC GACGGGGAAC AGGTATCTGT TTCCTTCAAT
GGACAGGAGG TATCTACCGT AGCAAAAAAT GGCAAATGGA TGGTGAAACT AAATCCACTG
CCATATATCA CTACGCCCGC AACGATGACC ATCAAAGGCA CCAATACCGT CAGTATCAGC
GACGTCCTGG TAGGAGAAGT ATGGGTGTGT AGCGGACAAT CAAACATGGA ACGCCAGCTG
GGACCAAGAC CGCCACAGCT ACCTATCACC AACTGGGAAC AGGAAAGAGA TAAAGCCAAT
TACCCCCTGA TCAGGGAATA TTATGTACCG CTGAAGTATT CTGCTGAAAA GATCCCGGAC
GTACACCAGC AATGGACTGT CTGCTCTCCA CAGACAGCCG CCGACTTTTC TGCAGTAGGT
TATTTCTTTA CCAGCGAATT ATACAAGAAA TTAAAGATCC CTGTAGGTTT TATCTTCACC
GCTTATGGTG GTACGCCGGC GGAAGACTGG ACCAGCGAAG AAGCCCTTAA CAGCGATCCC
GCACTGGCCG ATTTCTCAAA AAACTACGAC AATATCAAAT ATGGATACAT GCCACAGGGC
AAGAAGAAAA GCGGCCTCTA TAATGGCATG ATCTACCCGA TTCTACCCTA CGCCGTAAAA
GGTGTCGCCT GGTACCAGGG AGAAGCCAAT AACGAATTAC CAGGGATCTA TCCGGCCATT
CTCTCTAATA TGATCCGGAA CTGGCGTACC GACTTCGGAC AGGGAGACAT CCCCTTCCTG
ATTGTACAGA TCGCCCCCTA CAAAGACATG ACGCCTGAGA TCAGAGAAGC GCAATTGCTC
GTAACAAAAC AGGTAAAAAA CACAGCCCTG ATCGTTACTA CGGACTGCGG AGATCCCAAG
GATATCCACC CGTCCAATAA ACGTCCTGTA GGCGAACGCC TGGCTACAGC TGCTATCGGT
ATGGTCTATC AGCAACCGGG AGAATATGCC GGCCCTGTTT ACGAGGGATA CGAAGTTAAA
GGTCATGAAA TCATCGTCTA TTTCTCGCAC ACCGGCGAAG GCTTAAAAAC AAAGGCCAAT
ACAGCTTTAA AAGGCTTTAC AATAGCAGGC GCGGATAAAC AGTTCCAGCC AGCGAAGGCG
GTGATTCAGG GAAACAGTAT CATCGTCTCC CGCAAAGGGC TGAAGGATCC TGTAGCAGTA
AGATATGGCT GGGCGAATGT ACCGGATGTA AACCTGTATA ATTCGGCTGA CCTGCCTGCT
TCTCCGTTCA GAACAGATAC AGGAAAATAA
 
Protein sequence
MTNMNCFNLT CALLLALPLA LKATVKPHSL FTDHMVLQKG VPVPVWGEAA DGEQVSVSFN 
GQEVSTVAKN GKWMVKLNPL PYITTPATMT IKGTNTVSIS DVLVGEVWVC SGQSNMERQL
GPRPPQLPIT NWEQERDKAN YPLIREYYVP LKYSAEKIPD VHQQWTVCSP QTAADFSAVG
YFFTSELYKK LKIPVGFIFT AYGGTPAEDW TSEEALNSDP ALADFSKNYD NIKYGYMPQG
KKKSGLYNGM IYPILPYAVK GVAWYQGEAN NELPGIYPAI LSNMIRNWRT DFGQGDIPFL
IVQIAPYKDM TPEIREAQLL VTKQVKNTAL IVTTDCGDPK DIHPSNKRPV GERLATAAIG
MVYQQPGEYA GPVYEGYEVK GHEIIVYFSH TGEGLKTKAN TALKGFTIAG ADKQFQPAKA
VIQGNSIIVS RKGLKDPVAV RYGWANVPDV NLYNSADLPA SPFRTDTGK