| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4841 |
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| Symbol | |
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| ID | 8361017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6047491 |
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| End bp | 6048903 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644966991 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003124476 |
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| Protein GI | 256423823 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00593007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000311175 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGAGTT CGGAAGAAAT GAGATCGTCG TTCGATCTCT ATAACTACAG TCCTGTTCCT
ATGTGGCTGT ATGATATCAA CAGTTTGCAA ATACTGGCTG TCAATGATGC TGCCTGTAGG
GAATATGGTT ATTCCCGTGA AAAATTTCTT ACCCTGAAAG TGGATGTCTT ATGGCATGCA
CTCTATTCCA GCGCCATGAT GGACCTTATT AATAGTGCCG CCAGACAGCG ATTACCTTAT
ATGGGGACGG TGAAATTCAT CACCCGTAAG GGTGATATGG TGATTGTGGA TCTACAGGCA
ACGCCTATGA CGGCGTGGCA TGAGGATGCG CGTATTGTAT CGGCGATCAA TGTCACAGAG
CGGGAGAAGG CAAAGGAAAC CGAGCGGCAG CTGAGGCTGA GTAACGAGCG CTTCAATTAT
GTGAGCAGGG CCAGTAATGA GGCGATATAC GACTGGGACC TGGCGGCTGA CAATATTTAC
TGGGCGGATG GTTTTTGCCG TGTATTCGGG TATCCGCTGG ATGGGAAGCC GTATCCGCTT
AAAAGCTGGT CCAGGATGGT GCATCCGGAC GATCTGCTGA AAACCCGGGA AAGCCTGCGT
TGCGCCTTAC AGGACATGCA TACGATTTAC TGGCATTCGC AGTACCGGTT CCGGCATTCC
ATGGGTACTT ACCTGTTTGT GGAGGAAACC GGCTATATCA TCAGAAATAA GGAGGGAAGG
GCGGTGAGGA TGATCGGTAC GCTCCGCGAT ATTACTACGC AGCGGGAGAC GGCTGCTGCA
TTGGAGGCGT CAGAGAAACG TTACAGTGAT CTGTTTCATC TGAGTCCCTT GCCGATGTGG
GTATATGATA CGGAAACCTA TCAATTCCTT GACGTCAATA AGGCTGCTGT GACGCTTTAT
GGGTATAGCA GGGAAGAATT CCTGTCCATG ACACTCCGGG ACATCAGGAA GCCTGAAAAC
AGGCATGAGG TAGATGAAAT CATCAAGGAC CGGATCAAAC CGGGGGAATA TCACTCGGCG
ATCGTCAAAC ATGTGAAGAA ATCGGGAGAC GAAGTCATCG CTAATGTGAG TGGCAATTCG
ATTGCTTATT GTGATAAGGA GGCCCGGGTA GTGGTCGCAT TTGACATTAC GGAGAAGCGC
AAGTATATCA GTGCGATAGA GGAACAAAAC GCCCGCCTGG AGGAAATCAC CTGGACACAG
GCGCATCTTG TACGGGCGCC GCTGGCACGT ATCATGGGTA TTGTGCAGTT ATTGGGAGAT
GCCGGGGTAG ATGTCGCTAC AAAAGAGACG TTGTTATCAT ATTTGCAGGT ATCTGCAACG
GAGCTGGACG ATATTATCCG GAAGATCATC CGGAAGAGCC AGGAGGTGAC AGAGAAACAT
GATTATTTAT CGCCCGGGCT TACCGGATGT TAG
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| Protein sequence | MMSSEEMRSS FDLYNYSPVP MWLYDINSLQ ILAVNDAACR EYGYSREKFL TLKVDVLWHA
LYSSAMMDLI NSAARQRLPY MGTVKFITRK GDMVIVDLQA TPMTAWHEDA RIVSAINVTE
REKAKETERQ LRLSNERFNY VSRASNEAIY DWDLAADNIY WADGFCRVFG YPLDGKPYPL
KSWSRMVHPD DLLKTRESLR CALQDMHTIY WHSQYRFRHS MGTYLFVEET GYIIRNKEGR
AVRMIGTLRD ITTQRETAAA LEASEKRYSD LFHLSPLPMW VYDTETYQFL DVNKAAVTLY
GYSREEFLSM TLRDIRKPEN RHEVDEIIKD RIKPGEYHSA IVKHVKKSGD EVIANVSGNS
IAYCDKEARV VVAFDITEKR KYISAIEEQN ARLEEITWTQ AHLVRAPLAR IMGIVQLLGD
AGVDVATKET LLSYLQVSAT ELDDIIRKII RKSQEVTEKH DYLSPGLTGC
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