Gene Cpin_4771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4771 
Symbol 
ID8360947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5947616 
End bp5947936 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content42% 
IMG OID644966922 
Productresponse regulator receiver protein 
Protein accessionYP_003124407 
Protein GI256423754 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0255071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.533195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTTT CCCCCAGGGA GATCGTTTAT GTCACTGTCG ATGCTAATTA TATTAAACTG 
ACGCTTGTTA ACAACCGCAT TATACCCGCC CGATACAGTC TGACCGAATT TAAAGCACAC
CTTCCTCCCG AAGATTTCGT CCGCACACAC AGAAATTACA TCGTCTCCAT CCGGCACATT
GACAGTGTCG GAAGGAGTAT TGCTACTGAA AGAGATGGAG AGAAAACGAA GGAAGGAGAA
ATTATAATGA AGAATGGTCA TACAATACCC TTGAGCGAAC GTTGTAAAAA ACAGGTATTT
GCCTGTTTTA AACAATTATA G
 
Protein sequence
MAVSPREIVY VTVDANYIKL TLVNNRIIPA RYSLTEFKAH LPPEDFVRTH RNYIVSIRHI 
DSVGRSIATE RDGEKTKEGE IIMKNGHTIP LSERCKKQVF ACFKQL