| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4735 |
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| Symbol | |
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| ID | 8360911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 5910168 |
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| End bp | 5910857 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644966887 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003124372 |
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| Protein GI | 256423719 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.261027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000239774 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATACAC CTTATCCGGC TGCCTCCGCC CTACAGGAGG CCCCCCATTC AAGAATCCTG
CTGGTAACAG GAGACGCTGC TATTCTCCGG AAGTTCCGTC AATTGCTGCT GCCTACGTAT
GATGTCGTGG CGACTAATAC TGTGGCTGAA GCTATTGATA TTGCCAACCG CCAGTTACCT
GACCTGATCC TGTGTGACGT ATTAGTAGCC GATACTTCGG GCTACCAGTT CCTGATCTCA
TTGCGGGACG ATCCATCCAT GAAACACCTG CCCTTTATTC TGTTTAACCG ACTACATGTC
GCGTCTAATA TCAGGAAAGG TATGAACCTT GGTGCGGATG ATTTCCTGGT CTTCCCCTTC
ACCGGTGATG AATTGATCAA GAGCATACAA TCCCGGCTCA ACAGATATCA GCATATCCGC
GAGACCATGC AACCACGCGA AACGCTGATC CGTCAACTAC ACGTGGAAGG TAAAAATCCT
ATCAATGAGC GCCTGAGTAA AACAGAAGCG AAAATCCTGG ATATGATCGC CAGGGGAATG
AGCAGCAGGG ACATTGCATC CTACAAATGC ATTAGTGTAC GCACGGTAGA CAACCACCGG
CATAACATTA CTAAAAAGCT CCAGCTTTCA GGACCAAATG CACTGGTAAA ATTTGCGATC
GGTTATGGCG GTGTGTTAAG CAGACAATAG
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| Protein sequence | MNTPYPAASA LQEAPHSRIL LVTGDAAILR KFRQLLLPTY DVVATNTVAE AIDIANRQLP
DLILCDVLVA DTSGYQFLIS LRDDPSMKHL PFILFNRLHV ASNIRKGMNL GADDFLVFPF
TGDELIKSIQ SRLNRYQHIR ETMQPRETLI RQLHVEGKNP INERLSKTEA KILDMIARGM
SSRDIASYKC ISVRTVDNHR HNITKKLQLS GPNALVKFAI GYGGVLSRQ
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