| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_4722 |
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| Symbol | glgC |
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| ID | 8360898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 5893119 |
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| End bp | 5894390 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644966875 |
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| Product | glucose-1-phosphate adenylyltransferase |
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| Protein accession | YP_003124360 |
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| Protein GI | 256423707 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0448] ADP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR02091] glucose-1-phosphate adenylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00359952 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCTAACG CAGTTATCTC CCTTATCTTA GGTGGCGGAT CAGGTACCCG CTTGTACCCC
CTTACGCGTA AGCGTTCTAA GCCAGCCGTA CCCGTTGCCG GTAAATACCG CCTCGTGGAT
ATTCCCATTT CGAATTGCCT GAATGCTGAC ATGAACCGCA TTTTTGTGCT GACACAGTTT
AACTCCGCGT CGTTAAACAA GCATATCAAA AATACTTATC ATTTCAGCCA TTTCAGTAAG
GCGTTCGTAG ACATCCTGGC TGCCGAACAG ACACCTGACA ATCCAACCTG GTACCAGGGC
ACCGCGGATG CCGTACGCCA GTGTCTGCAT CATATTGACA ATTATGAATT TGAATATATA
CTGATCCTTT CTGGTGACCA GCTGTATCAG ATGGACTTCC GCGAAATGTT ACAGCATCAT
ATAGAAAGCC AGGCAGAAGT ATCTATTGCC ACCATTCCGG TGAATGCAAA AGATGCGTCT
GACTTTGGTA TCCTCAAGAC CGACAATACT GGTCTGATCA CTTCATTCAC CGAAAAACCC
AAACAAGACG TCCTGGCGCC ATGGGCTTCT CCCGTAAGTG ACGAAATGCA GTCAGAAGGC
AGAGTCTACC TGGCCAGCAT GGGTATCTAT ATCTTCAGCA GACAAACCCT GTATGACCTG
CTGAATGGTC AGGAATCGTC TACCGACTTC GGTAAGGAAC TGATCCCTTA CGCAATCAAT
GCCGATATGA AGGTGGTTAG CTACCAGTAT ACCGGTTACT GGACGGATAT CGGAAACATC
AGCTCATTCT GGGAAGCAAA CCTCGGACTG ACCGACGAGA TTCCTAAATT CAACCTCTTC
GACGAATCAC ATATTATATA TTCCCGCGCA CGTATGCTGC CGCCGGCTAA GATTTCCGGT
ACCATGAAAA ATACCATCAT CTCTGATGGT AGTATCATCC TGGATAGTCA GTTGGAGCGT
TGTGTAGTAG GTATCAGAAC CCGTATCGGC AGAAACTCTG TTATTACCAA TAGCTATGTG
ATGGGGGCCG ATTATTACCA GACCCTTGAG GACCTGGAAA AAGCAAAAGG TAAAGGACAT
CCGCCGATGG GTATCGGTGA CAATTGTGTG ATCAATAATG CGATCATTGA TAAGAACTGT
AGCATCGGTA ACAATGTTCG TATCAATGTA GGTGATCCGC TGCCGGATGG CGACCATGAA
AAGTATGCCG TAAAAGACGG TATAGTGGTG ATCAAGAATG GCATGGTATT ACCGGATGGC
TTTGTAATCT AG
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| Protein sequence | MSNAVISLIL GGGSGTRLYP LTRKRSKPAV PVAGKYRLVD IPISNCLNAD MNRIFVLTQF
NSASLNKHIK NTYHFSHFSK AFVDILAAEQ TPDNPTWYQG TADAVRQCLH HIDNYEFEYI
LILSGDQLYQ MDFREMLQHH IESQAEVSIA TIPVNAKDAS DFGILKTDNT GLITSFTEKP
KQDVLAPWAS PVSDEMQSEG RVYLASMGIY IFSRQTLYDL LNGQESSTDF GKELIPYAIN
ADMKVVSYQY TGYWTDIGNI SSFWEANLGL TDEIPKFNLF DESHIIYSRA RMLPPAKISG
TMKNTIISDG SIILDSQLER CVVGIRTRIG RNSVITNSYV MGADYYQTLE DLEKAKGKGH
PPMGIGDNCV INNAIIDKNC SIGNNVRINV GDPLPDGDHE KYAVKDGIVV IKNGMVLPDG
FVI
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