Gene Cpin_4714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4714 
Symbol 
ID8360890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5877919 
End bp5878455 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content44% 
IMG OID644966867 
Productprotein of unknown function DUF192 
Protein accessionYP_003124352 
Protein GI256423699 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0195502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0114634 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCTT CCCGATGGCT GCTATTCAAT GCAGGACTTC TTATTTATAT AGCCTCCTGT 
CAGAACAGAA ATGGCAATCA GGCTTTTAAC AGTAATGTAT CGTCTGCGGA TGCGACCATC
AGCACAAGGA CAGACAGCGG ACCGCCATTC AGGAAAGAAG GTGTTCTTTA TTTTCTCAGT
AAGGTCAATA ACGATACGCT CCGGCAGATC GATATCGAAC TGGCGACTGA TGATCAGGAA
AGAGCGCAGG GATTAATGTA CCGTAAGTCG ATGCTGGACA CCCAGGGTAT GCTGTTCATT
TTCCCTCATG CGGAAGAACA GTCCTTCTGG ATGAAAGACA CTTATATCTC TCTTGACATC
GTCTATCTGA ATGAGAAAAA AGAGATCGTG TCCGTACAAA AGTATACGAC ACCACTTTCA
GAAGAGAGTC TTCCGTCCTT CAAAAAAGCA CAGTATGTGC TTGAAGTGAA TGCCGGATTT
TGCGATAAAT ACCACATCGC GTATGGCGAT AAAATCGCCT ATAAAGAGAT CAAATAA
 
Protein sequence
MSASRWLLFN AGLLIYIASC QNRNGNQAFN SNVSSADATI STRTDSGPPF RKEGVLYFLS 
KVNNDTLRQI DIELATDDQE RAQGLMYRKS MLDTQGMLFI FPHAEEQSFW MKDTYISLDI
VYLNEKKEIV SVQKYTTPLS EESLPSFKKA QYVLEVNAGF CDKYHIAYGD KIAYKEIK