Gene Cpin_4671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_4671 
Symbol 
ID8360845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp5830454 
End bp5831953 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content48% 
IMG OID644966822 
Productmagnesium protoporphyrin chelatase, putative 
Protein accessionYP_003124309 
Protein GI256423656 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1239] Mg-chelatase subunit ChlI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.268952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000156753 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATCA ACATAAGTAC GTTAGGTGAA TTAAAGAAGA GTGGATATAA ACCTAAATCC 
GTTAAAGAAG AGATCAGACA AAACCTGATC CGTAAACTCC AGCAAAAAGA AAACGCATTC
CCCGGTATCA TCGGCTACGA AGACACCGTT ATTCCTGATA CGGAAAGAGC CCTGCTCTCC
CGTCATAATA TCCTGTTCCT CGGTCTCCGC GGACAGGCAA AAACTCGTAT GGCCCGGCAG
ATGGTTTCCC TGCTGGACGA ATACATTCCC ATCGTGGAAG GTTCTGAAGT GAACGATAGT
CCCTTCGAAC CACTCTCCCG TCACGCACGT GATATCGTTG CCGAACTGGG TGACGCCACG
CCTATCTCAT GGGTACACCG TGACCAGCGT TACAGCGAAA AACTCGCTAC GCCGGATGTA
TCCGTAGCTG ACCTCGTCGG TGATATCGAC CCGATCAAGG CTGCTAACAT GAAACTGAAC
TATGCAGACG AGCGTGTGAT CCACTTCGGT ATCATTCCAC GCTCCAACAG AGGCATCTTC
GTGATCAACG AATTGCCCGA CCTGCAGGCC CGTATACAGG TATCCCTGTT CAACATCCTC
CAGGAAGGCG ATATCCAGAT CCGTGGTTTT AAAGTACGTA TGCCACTGGA TATTCTCTTC
GTGTTCACTG CAAATCCGGA AGACTATACC AATCGTGGTT CCATCGTAAC GCCACTCAAA
GACCGTATAG AAAGCCAGAT CATTACACAC TATCCGAAGA ATATCGAAAA CTCCCTGCTC
ATTACCGAAC AGGAAGCCAA TGTACATGAT GAACAACGCC ATGTACATAT CAGCGATATG
ATCAAGCGCC TTATCGAACA GGTGGCTTTT GAAGCGCGTA ACAGTGAGTA CGTTGACAAA
AAGAGCGGTG TATCTGCCCG TCTGACCATC GCCGCTTATG AAAACGCAGT GAGCGCAGGC
GAACGCAGAG CCATCATCAA CAAGGAAAAA GAAACTTACG TACGTATAGC CGACCTCCAG
GGTATTATTC CGGCCATTAC CGGTAAAATA GAGCTGGTAT ATGAAGGCGA ACAGGAAGGG
CCGTTACAGG TGGCCGTAAA TCTCCTCGAC AAGGCCATCC GCAGCGTCTT CTCCCAGTAC
TTCCCGAACC CGGATTCCTT CAAAAAACGT AAACAGAGCG CTGCTGGCGA GAATCCTTAC
AGGGCGGTTA TCCAATGGTT TGATAAAGGC AATGCCGTAC AGTTATTGCA GGATGTAAAT
GATAAGCAAT ACGAGACATC CCTTCAGAAG GTAGATGGTC TGAAAGAGCT GATCAAAGGG
AAATTCCCAC ATGCCAATAA CAAAGAACAG TTACTGCTCA TGGAATTCGT ATTACACGGC
CTCGCTTCCT ACTCCCTCAT CAGTAAAAAG GTGGTGGAAA ACGAGACCCG CTTCAGTGAT
CTCCTTGGTA CCATGATGAA CTTCGGTTCC GGTACAGAAG AAGAAAACGA CGAATTCTAA
 
Protein sequence
MNINISTLGE LKKSGYKPKS VKEEIRQNLI RKLQQKENAF PGIIGYEDTV IPDTERALLS 
RHNILFLGLR GQAKTRMARQ MVSLLDEYIP IVEGSEVNDS PFEPLSRHAR DIVAELGDAT
PISWVHRDQR YSEKLATPDV SVADLVGDID PIKAANMKLN YADERVIHFG IIPRSNRGIF
VINELPDLQA RIQVSLFNIL QEGDIQIRGF KVRMPLDILF VFTANPEDYT NRGSIVTPLK
DRIESQIITH YPKNIENSLL ITEQEANVHD EQRHVHISDM IKRLIEQVAF EARNSEYVDK
KSGVSARLTI AAYENAVSAG ERRAIINKEK ETYVRIADLQ GIIPAITGKI ELVYEGEQEG
PLQVAVNLLD KAIRSVFSQY FPNPDSFKKR KQSAAGENPY RAVIQWFDKG NAVQLLQDVN
DKQYETSLQK VDGLKELIKG KFPHANNKEQ LLLMEFVLHG LASYSLISKK VVENETRFSD
LLGTMMNFGS GTEEENDEF